Gene Information

Name : D781_4186 (D781_4186)
Accession : YP_007346556.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4421635 - 4423050 bp
Length : 1416 bp
Strand : -
Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase

DNA sequence :
ATGGCAGGAAAGAAACCCACCAACAAATCTAACGAGGCGCAGGCACCGCGCGATCGCCAAATGGAAGGGCTGAAGATGCC
GCCGCATTCGCTGGAGGCGGAACAGTCCGTGTTGGGCGGTTTAATGCTGGATAACGAGCGCTGGGACAACGTGGCGGAAC
GCGTGGTCGCCAACGACTTCTTCAGCCGTCCGCACCGCTTGATCTTTACCGAGATGCAGCGCCTGCTGGAAATGAGCAAG
CCGATTGACCTGATCACCCTGTCCGAATCGCTGGAACAGCGGGATGAGCTGGATTCCGTCGGCGGCTTCGCCTATCTGGC
CGAGCTGGCGAAGAACACGCCGAGCGCCGCCAACATCGGCGCCTATGCCGATATCGTGCGCGAACGCGCGGTGGTGCGCG
AGATGATCGCGGTGGCCAATGAGATCGCCGACGCCGGTTACGATCCGCAGGGGCGCACCAGCGAAGACCTGCTCGACCTG
GCGGAATCGCGGGTGTTCCAGATTGCGGAAAACCGCGCCAATAAGGATGAAGGACCGAAAAGCGTCGACCAGATCCTGGA
AGCCACCGTATCCCGTATTGAATCGCTGTACCAGACGCCGCACGACGGCGTCACCGGGGTGGACACCGGCTATCAGGATC
TGAACAAGAAAACCGCCGGCCTGCAGCGATCGGATCTGATCATCGTGGCGGCGCGTCCGTCGATGGGTAAAACCACCTTT
GCGATGAACCTGTGTGAAAACGCCGCGATGCTGCAGGACAAACCGGTGCTGATCTTCAGCCTGGAGATGCCCGGCGAGCA
GATCATGATGCGTATGCTGGCCTCGCTGTCGCGCGTCGACCAGACTCGCATCCGTACCGGCCAGTTGGACGATGAGGACT
GGGCGCGCATTTCCAGCACCATGGGCATCCTGCTGGAGAAGCGCAATATGTATATCGACGACTCCTCCGGCCTGACGCCG
ACCGAGGTGCGCTCGCGCGCCCGCCGTATTTTCCGTGAAAATGACGGCCTGAGCCTGATCATGATCGACTACCTGCAGCT
GATGCGCGTGCCGTCGCTGTCGGACAACCGAACGCTGGAAATCGCCGAAATCTCGCGCTCGCTGAAGGCGCTGGCGAAGG
AACTGCAGGTGCCGGTGGTGGCGCTGTCGCAGCTGAACCGCTCTCTGGAGCAGCGCGCCGACAAACGCCCGGTCAACTCC
GACCTGCGTGAATCCGGCTCCATCGAGCAGGATGCCGACCTTATCATGTTTATCTACCGTGATGAGGTGTACCACGAGAA
CAGCGATCTGAAAGGGATCGCCGAAATTATTATTGGTAAGCAGCGTAACGGCCCGATCGGTACGGTACGCCTGACCTTTA
ACGGCCAGTGGTCGCGCTTTGACAACTACGCCGGCCCGCAATACGACGACGAATAA

Protein sequence :
MAGKKPTNKSNEAQAPRDRQMEGLKMPPHSLEAEQSVLGGLMLDNERWDNVAERVVANDFFSRPHRLIFTEMQRLLEMSK
PIDLITLSESLEQRDELDSVGGFAYLAELAKNTPSAANIGAYADIVRERAVVREMIAVANEIADAGYDPQGRTSEDLLDL
AESRVFQIAENRANKDEGPKSVDQILEATVSRIESLYQTPHDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTF
AMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKRNMYIDDSSGLTP
TEVRSRARRIFRENDGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS
DLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-99 54
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 4e-105 54
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-105 54
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 4e-104 53
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-99 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-84 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-90 49
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-90 49
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-80 45