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Name : D781_3944 (D781_3944) Accession : YP_007346319.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Virulence Product : type III secretion protein, HrcV family Function : - COG functional category : - COG ID : - EC number : - Position : 4159717 - 4161840 bp Length : 2124 bp Strand : - Note : PFAM: FHIPEP family; TIGRFAM: type III secretion protein, HrcV family DNA sequence : ATGAACAGCCTATTTGCCATCCTCAATAAAATTGCTATCAGCGCGATGCAGCGTTCGGAGATCGTCGGCGCGGCGTTTGC CCTGGCGCTGGTGTTTATGCTGATCGTCCCGCTGCCGCTGGGGCTGATCGACATGCTGATCGCCGTCAATATCTGCCTCT CCTCGCTGCTGATCGTACTGGCGATGTACCTGCCCAAGCCGCTGGCGTTCTCTACCTTTCCGGCGGTGCTGCTGCTGACC ACCATGTTCCGGCTGGCGCTGTCGATCTCGGTGACCCGCCAGATCCTGATCCAGCAGGACGCCGGCCATATCGTTGAAGC GTTCGGCAACTTCGTGGTGGGCGGCAATCTGGCGGTGGGGATGGTGATGTTCCTGATCCTGACGGTGGTGAACTTCCTGG TGATCACCAAAGGATCGGAGCGCGTGGCGGAGGTGGCGGCGCGCTTCACGCTGGACGCCATGCCGGGCAAACAGATGTCG ATCGACAGCGATCTGCGCGCCGGACTGATTGACGTGCACCAGGCGCGCAACCGCCGCAACGAGCTGGCGAAAGAGAGCCA GCTGTTCGGCGCGATGGACGGGGCGATGAAGTTTGTCAAAGGCGACGCCATCGCCGGGCTGGTGATCCTGTGCATCAACC TGATCGGTGGCTTCAGCATCGGCGTGCTGCAGCTGGATATGGCGCCCGGCGATGCGATGCATACCTACTCGATCCTGACC ATCGGCGACGGCCTGATCGCCCAGATCCCGGCGCTGCTGATCTCCCTGACCGCCGGCATGATCATTACCCGCGTCTCTTC GGAGAGCGACAGCACGGAAACGCCGAACGTCGGCCGCGAGATCGCCGAGCAGCTCACCAGCCAGCCCAAGGCGTGGATCC TGGCGTCGATGGGGATGATCGGCTTTGCGCTGGTGCCCGGCATGCCGGGCGTGGTGTTCTCGCTGCTGGCGCTGATCACC CTCGGCGGCGGCGGTTTTCAGGTGTGGCGCGCGCGGCAGGAAATGCTGCTGGCGAAGCCGCAGATCGAAAACGAAGTGAT CCCGCCGGAGCTGAACGGCCGCGAGGATCTGCGCCAGTTCAACCCAACGCGTCCCTGGCTGATCCAGTTCCACACCTCGC GCCGCGGCGCGGCGGAGACGCTGGATCTGGTGCAGGAGATCCGTCGGCTGCGCAACCGCATCGTTTACCACTTTGGTTTT ACCCTGCCGGCGTTTGATATCGAATTTACCGATAAGCAGCCGGTCGATGAGTTCCGCTTCTCGGTGTACGAGATCCCGAA AGTGGTCGGCACCTTCGACAGCGCATTAACGGCGCTGGACGTGCGGCAGCTGGAGAGCCTGAGCGAGGCGGAGAGAGAAG GCGCCGTCCCCGGCGACGAGGCGCGCGGCGAAGAGGATTATCTGTGGCTGGCGGCGGGTCATCCGCTGCTGGCGCGTGAG GATCTGACGCGTCACAGCGCCGGCGAGCTGCTGCTGACGCGTATGGAAGACGCCATTCATGCCAGCAGCCCACACTTTAT CGGCCTGCAGGAGACGCGGGCGCTGATGAGCTGGCTGGATGCCGAACAGCCGGAACTGGCTCAGGAGCTGCAGCGGGTGA TGCCGCTGACGCGTTTTTCCGGCGTGCTGCAGAAATTGGTGGCGGAGCGCATTCCGCTGCGCTCCGTCCGCGCCATCGGC GAGGCGCTGATCGAACACGGCCAGCACGAGCGGGACGTCAACCTGCTGACGGAGCAGGTGCGCATCACGCTGAAAACCCA CCTGTGCCACCAGTACGGCCAGCCTGACGGCATTCACGCCTGGCTGTTGACGCCGGAGCTGGAAGAGGCGCTGCGCGACA GCCTGCGCCAGACCCAGAACGACATCTTCTTCGCCCTGAGCCAGCAGCAGATCCAGCTGATTCATCAGGAGGTGAAGCAG GCCTACGCGCCGGGTCAGGACAAACAGGCGGTGCTGCTGGCGGCGCAGGATCTGCGCGGGCCGCTGCGGGCGCTGATTCA GGAGCGTTTCCACGCGGTGCCGGTGCTCTCTTTCGCCGAGCTGGAGCCGGCGCTGGCGGTTCAGGTGCTGGGGCGTCTCG ACGTCGATCCGGCCTTCTATTCACTCACCCCCTGGGAGGATTAA Protein sequence : MNSLFAILNKIAISAMQRSEIVGAAFALALVFMLIVPLPLGLIDMLIAVNICLSSLLIVLAMYLPKPLAFSTFPAVLLLT TMFRLALSISVTRQILIQQDAGHIVEAFGNFVVGGNLAVGMVMFLILTVVNFLVITKGSERVAEVAARFTLDAMPGKQMS IDSDLRAGLIDVHQARNRRNELAKESQLFGAMDGAMKFVKGDAIAGLVILCINLIGGFSIGVLQLDMAPGDAMHTYSILT IGDGLIAQIPALLISLTAGMIITRVSSESDSTETPNVGREIAEQLTSQPKAWILASMGMIGFALVPGMPGVVFSLLALIT LGGGGFQVWRARQEMLLAKPQIENEVIPPELNGREDLRQFNPTRPWLIQFHTSRRGAAETLDLVQEIRRLRNRIVYHFGF TLPAFDIEFTDKQPVDEFRFSVYEIPKVVGTFDSALTALDVRQLESLSEAEREGAVPGDEARGEEDYLWLAAGHPLLARE DLTRHSAGELLLTRMEDAIHASSPHFIGLQETRALMSWLDAEQPELAQELQRVMPLTRFSGVLQKLVAERIPLRSVRAIG EALIEHGQHERDVNLLTEQVRITLKTHLCHQYGQPDGIHAWLLTPELEEALRDSLRQTQNDIFFALSQQQIQLIHQEVKQ AYAPGQDKQAVLLAAQDLRGPLRALIQERFHAVPVLSFAELEPALAVQVLGRLDVDPAFYSLTPWED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | AAB05999.2 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 66 |
| hrcV | AAT96256.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 62 |
| hrcV | AAT96337.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 62 |
| hrcV | AAT96297.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 62 |
| hrcV | ABA47273.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 62 |
| hrcV | ABQ88352.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 61 |
| hrpI | AAA03015.1 | HrpI | Virulence | Hrp PAI | Protein | 0.0 | 61 |
| hrcV | NP_791229.1 | type III secretion protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 61 |
| hrcV | AAT96139.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 61 |
| hrcV | AAT96193.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 61 |
| hrcV | AAG33877.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 60 |
| hrcV | AAR25631.1 | type III secretion protein HrcV | Not tested | Not named | Protein | 0.0 | 58 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 3e-125 | 43 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 3e-100 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D781_3944 | YP_007346319.1 | type III secretion protein, HrcV family | VFG0064 | Protein | 3e-130 | 44 |
| D781_3944 | YP_007346319.1 | type III secretion protein, HrcV family | VFG0198 | Protein | 4e-114 | 42 |
| D781_3944 | YP_007346319.1 | type III secretion protein, HrcV family | VFG0384 | Protein | 4e-123 | 42 |
