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Name : D781_3924 (D781_3924) Accession : YP_007346299.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Virulence Product : sigma-54 interacting regulator Function : - COG functional category : - COG ID : - EC number : - Position : 4140455 - 4141432 bp Length : 978 bp Strand : + Note : PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain DNA sequence : ATGGTTAAGCCTGTTGATTCCAGAATGCCCGTGCGGGCACCGGCCGATTGCGCCAGGGAACGTCACGCCTCACACGCGTC TGCCTCAGACGCGCCGCCGCCCGACGATATCCACGGCTATCTGCATAAGTTAACCAAAATCGTCGCCCCGCTGCACGTGG ATGTCCTGCTCGAAGGGGAAACCGGCACCGGCAAAGATACGCTGGCCCGGCGCATCTATGAGCTGTCAGGCGGCAACGGG CCGTTTGTCCCCGTTAACTGCGGCGCCATCCCGGAAAGCCTGGCGGAAAGCGAGCTGTTCGGCGTTGAGGCCGGCGCCTA CACCGGCGCCAGCCACGCTCGCGCCGGCTATCTCGAAACGGCGAACAACGGCATTTTGTTCCTCGATGAAATCGACAGCA TGCCGCTGACGGTGCAGGCCAAACTGCTGCGCGTGCTGGAAACCCGCACCATTACGCGCCTCGGCAGCACCAAACCCATC AGCCTGCACCTGCGGGTGATCGTCGCCGCGCAGACGCCGCTGGAGCAACTGGTGGAGGCGGGCCGTTTCCGCCGCGATCT CTGTTTCCGCCTGAACACCATCAAGCTGGAGACGCCCACGCTGCGCTCGCGCCCCGAACTGATTATTCCGCTGTTCCGCC GCTTTGCCATCGAGTCGGCGCTGCGGCTCGGCATGCCGCACCCGCCGCGCAGCACCGCGCTGGACGAGGCGCTGCTGCTG CACTGCTGGCCCGGCAATCTGCGCGAGCTGAAGGCGGCGGCCGAACGCTTTATCCTCGGCCTGCCGCCGCTCAACCAGGC GCTGCCGCAGGAGAGCGGCGCGGTGCTGCTGAAGGAGCGTCTCAAACGCATCGAACGCAGCCTGATCCACGACTGTCTGC ACCGCCACGACCACCGCATCGACGACGTGGTGCACGAACTGGGCATCCCGCGCCGCACGCTCTACCACCGCCTGAAGCAG CTCAATATACACGCCTGA Protein sequence : MVKPVDSRMPVRAPADCARERHASHASASDAPPPDDIHGYLHKLTKIVAPLHVDVLLEGETGTGKDTLARRIYELSGGNG PFVPVNCGAIPESLAESELFGVEAGAYTGASHARAGYLETANNGILFLDEIDSMPLTVQAKLLRVLETRTITRLGSTKPI SLHLRVIVAAQTPLEQLVEAGRFRRDLCFRLNTIKLETPTLRSRPELIIPLFRRFAIESALRLGMPHPPRSTALDEALLL HCWPGNLRELKAAAERFILGLPPLNQALPQESGAVLLKERLKRIERSLIHDCLHRHDHRIDDVVHELGIPRRTLYHRLKQ LNIHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 2e-78 | 62 |
| unnamed | AAT96363.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 2e-80 | 62 |
| unnamed | AAT96283.1 | HrpS/HrpR-like protein | Not tested | S-PAI | Protein | 2e-80 | 62 |
| unnamed | AAT96324.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 2e-80 | 62 |
| hrpS | AAD24684.1 | sigma-54-dependent enhancer-binding protein HrpS | Virulence | Hrp PAI | Protein | 4e-74 | 61 |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 1e-69 | 59 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 1e-69 | 59 |
| hrpS | ABQ88367.1 | HrpS | Virulence | Hrp PAI | Protein | 7e-68 | 57 |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 1e-67 | 57 |
| hrpS | AAA17650.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 7e-68 | 57 |
| hrpR | AAC35799.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 2e-64 | 56 |
| hrpR | NP_791206.1 | type III transcriptional regulator HrpR | Virulence | Hrp PAI | Protein | 5e-67 | 56 |
| hrpR | AAC34752.1 | HrpR | Virulence | Hrp PAI | Protein | 1e-66 | 56 |
| hrpS | AAC35800.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 4e-68 | 55 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 9e-65 | 55 |
| hrpR | AAT96216.1 | HrpR | Virulence | T-PAI | Protein | 1e-66 | 54 |
| hrpR | AAT96162.1 | HrpR | Virulence | T-PAI | Protein | 1e-66 | 54 |
| hrpR | ABQ88368.1 | HrpR | Virulence | Hrp PAI | Protein | 5e-61 | 53 |
| hrpR | AAA17651.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 5e-61 | 53 |
