Gene Information

Name : D781_3851 (D781_3851)
Accession : YP_007346230.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4064401 - 4065255 bp
Length : 855 bp
Strand : -
Note : PFAM: Integrase core domain

DNA sequence :
ATGAAGTATGTCTTTATCGAAAAGCATCAGGCTGAGTTCAGTATCAAAGCCATGTGTCGGGTACTGCAAGTCGCCCGCAG
TGGCTGGTATGCCTGGCGTCAGCGTCGTCACCAGATAAACCGACGTCAACGGTTCCGACTTGTCTGCGATGATGCGGTTC
GACAGACCTTTGCCAAGGCAAAACAGCCTTATGGAGCGCCTCGTCTTGCTGATGAACTGCCGGAGTACAACATCAAGACT
ATCGCCGCCAGTCTACGTCGTCAGGGGCTGCGGGCGAAAGCCTCGCGCCGGTTCAGCCCGGTCAGTTACCGTGAGCATGG
TCTGCCAGTATCCGATAATCTGTTAAAGCAGGACTTTTACGCCAGCGGCCCGAATCAGAAGTGGGTGGGTGACATCACGT
ATCTGCGCACCGATGAAGGCTGGCTGTATCTGGCGGTGGTGATTGACCTGTGGTCGCGGTCAGTCATTGGCTGGTCGATG
TCGTCACGGATGACGGCACAGCTTGCCTGCGATGCACTGCAGATGGCCTTATGGCGGCGTAAACGCCCGGAAAATGTCAT
CGTGCACACAGACCGAGGTGGTCAGTACTGTTCAACGGATTACCAGAGCTTACTGAAACGGCATAATCTGCAGGGCAGTA
TGAGCGCTAAGGGCTGTTGTTACGACAATGCCTGTGCGGAAAGCTTCTTTCACTCACTGAAGGTGGAATATATCCACGGG
GAGGACTTTGCCAGCCGGGAAATAATGCGAACGGCAGTGTTTAATTATATCGAGTGCGATTACAATCGCTGGCGTCGTCA
CAGTGCCTGTGGCGGTCTTAGCCCGGAACAGTTTGAAACCCAAAACCTCGCTTAG

Protein sequence :
MKYVFIEKHQAEFSIKAMCRVLQVARSGWYAWRQRRHQINRRQRFRLVCDDAVRQTFAKAKQPYGAPRLADELPEYNIKT
IAASLRRQGLRAKASRRFSPVSYREHGLPVSDNLLKQDFYASGPNQKWVGDITYLRTDEGWLYLAVVIDLWSRSVIGWSM
SSRMTAQLACDALQMALWRRKRPENVIVHTDRGGQYCSTDYQSLLKRHNLQGSMSAKGCCYDNACAESFFHSLKVEYIHG
EDFASREIMRTAVFNYIECDYNRWRRHSACGGLSPEQFETQNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 8e-111 85
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-108 83
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-107 83
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 3e-108 83
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-42 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-42 42
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-42 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-43 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-43 42
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-43 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-43 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-43 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-43 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-43 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 6e-44 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3851 YP_007346230.1 transposase VFG1631 Protein 4e-111 85
D781_3851 YP_007346230.1 transposase VFG1706 Protein 9e-44 42