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Name : D781_3847 (D781_3847) Accession : YP_007346226.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 4059138 - 4061045 bp Length : 1908 bp Strand : - Note : PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D DNA sequence : ATGTATCGAATTGTTGTTTTGGTTTGTTTCTTTTTCGCTTGTTGCGGTTCTGCGCAGGCGGATAAATTTTCTGCTGACTT TCAGGGTGTTGATATCCATGAGTTTATCAATACCGTCAGCAGAAATTTAGGGAAAACAATCATTGTTGATCACACTGTGG AAGGCAAGGTTACGGTTCGTAGCTATGAACAGTTATCGCCTGAAGAGTATTATCAGTTTTTCCTGAACGTACTGGATGTA TATGGTTACGCCGTTATCAGCATGCCTAAAAATGTACTGAAAGTTATTCCGGCGAAAGAAGGGAAGCGAGCAACCTTGAC GCCGTTGAACGATGCCGCGGTAGGGGATGAGCTGGTGATGAAAATTGTCCCTTTGCACCATACTGCCGCCAAGGATGTGG CTCCCCTTATTCGTCAACTTAATGACAGCATTGGTGTAGGTAATGTCTCGCACTATGAAAACGGCAATGCCTTACTGATT ACGGGACGTGCCGACGTGGTCAGAAAACTGAGTGACCTAACGAAGAGAATGGACGAGGATAATGCAACCGGTGTACTTAC CATTCCTCTGGAGTATGCATCAGCAAAAGATGTTGCCCATATCGTCAATGAGCTATTGCATGGTGAGGGGCGCCATCGCA GTTCTCTTTCTGCGAACGGAAAGATCGTGCCGGACGAGCGGACAAATTCCGTATTGATTTCGGGGGACGAAACAACCCTG GATGAGTTGCAGGACATCATTGCCAGTCTTGATAAAGAGAAAACGTCTCACAATAGCACCAAAGTTGTCCATCTGAAGTA CGCTAAGGCTCAGAGCCTGGTTGATGTGTTGACCGGTGTGAGCGTTGGTTTACAAAATGAACACCAGTCTGAGTCTGTTG CTCCGGTATCGATCGTAAAGAATGTCGTTATTAAAGCAGATGAACATACAAACTCGCTGATATTGAGTGCATCGGCCGAT ATTATGCGGGATTTAGAAGACGTTATTGCGCAGTTAGATGTGCGCCGTGCTCAGGTATTGGTCGAGGCGATTATTGTTGA AATGCTCGATGCTGATGGTATCAACTTCGGCATTCAGTGGGCAAACAAGCACGCCGGCGGCACCCAGTTCTCTTCAGCAC AAACCCGTATCTCGTCGACCTTGGACAAAGGGATGGGCGATGTATTGAAAAATGCCAATGGTCTTGTCGCCGGGTTCTAT AGTGGAAACTGGGCCGGATTACTGACGGCGATCAGCAGCAGGAGCCAAAATAATATCTTGGCCACCCCCAGTATCGTGAC GCTGGACAACGAAGACGCCGAGTTTAGCGTTGGCCAGGACGTACCGATTCTAACCGGTTCACAGACCACTAACAGCGATA ATGTGTTTAACACCGTGTCGAGAAAAACCGTTGGGATTAAGTTGAAGGTTAAGCCGCAAATTAATAAAGGGCAGTCCGTT CAGTTACAAATCCAGCAGGAGGTTTCCAGCGTTGCGGATAACAGTGCCGGGGATAGTAACAGTCTTGGGGCAACGTTTAA TGTTAGAACGGTGAACAATTCGGTATTGGTGGATAGCGGTGAAACCGTTGTTGTCGGAGGCTTGCTTGACAAATCACAAT CGAAAAACAAAAGTGGCGTACCTTTTTTAAGCGATATTCCGGTGTTAGGACATTTGTTTAGTTCTTCGGGGCACAAGGAT AACAAACGTAATCTGGTATTGTTTATTCGCCCGACTATTATTCGTTCTGCCGATAGTTATTCACTGGAAAGCTATCGCAA GTCTCAGGATTTTAGCGATTCATTAGTGACGAAGAAAAAATGGAGTGATGCCTTGGATGATAAAATGGAGGATATTCGTT TATCTGAACAGTTTGTTTTCTTAAGGGCTAAAAAACAAATTGAATTGTTTTACGAGACAGCAAAATGA Protein sequence : MYRIVVLVCFFFACCGSAQADKFSADFQGVDIHEFINTVSRNLGKTIIVDHTVEGKVTVRSYEQLSPEEYYQFFLNVLDV YGYAVISMPKNVLKVIPAKEGKRATLTPLNDAAVGDELVMKIVPLHHTAAKDVAPLIRQLNDSIGVGNVSHYENGNALLI TGRADVVRKLSDLTKRMDEDNATGVLTIPLEYASAKDVAHIVNELLHGEGRHRSSLSANGKIVPDERTNSVLISGDETTL DELQDIIASLDKEKTSHNSTKVVHLKYAKAQSLVDVLTGVSVGLQNEHQSESVAPVSIVKNVVIKADEHTNSLILSASAD IMRDLEDVIAQLDVRRAQVLVEAIIVEMLDADGINFGIQWANKHAGGTQFSSAQTRISSTLDKGMGDVLKNANGLVAGFY SGNWAGLLTAISSRSQNNILATPSIVTLDNEDAEFSVGQDVPILTGSQTTNSDNVFNTVSRKTVGIKLKVKPQINKGQSV QLQIQQEVSSVADNSAGDSNSLGATFNVRTVNNSVLVDSGETVVVGGLLDKSQSKNKSGVPFLSDIPVLGHLFSSSGHKD NKRNLVLFIRPTIIRSADSYSLESYRKSQDFSDSLVTKKKWSDALDDKMEDIRLSEQFVFLRAKKQIELFYETAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-105 | 42 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 8e-114 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D781_3847 | YP_007346226.1 | general secretion pathway protein D | VFG2047 | Protein | 7e-103 | 42 |
