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Name : D781_3846 (D781_3846) Accession : YP_007346225.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Virulence Product : type II secretion system protein E (GspE) Function : - COG functional category : - COG ID : - EC number : - Position : 4057657 - 4059141 bp Length : 1485 bp Strand : - Note : PFAM: Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E DNA sequence : ATGACCGCTGGTTTACATATTCCGTTCAACTGGGCAAAACAGCATGGCGTCGTGATCTCTGAAGAGCCACAAGGGAAAAC GCTGTGGGTTTCGGTGGAGGCAAATCCCCTTGCTATTGCTGAATTGGCGCGCTTAATTAAAACACGCTGCCGAATGGTAA AGCTGGAAAGCAGTGAGTTTGACAAGATGTTGCTGAGTACCTATCAAAAAGGTAGCGGCAATGCGCAAAAGATGATGGAT GATCTTGGCACCGATCTGGATTTTTATTCCCTCGCGGAAGGGTTGCCTGAGCAGCAGGATTTATTGGATGAAAAGAATGA TGCGCCGATAATTCGGCTCATCAACGCGATGTTCAGCGAGGCCATTAAGGAGCGAGCTTCTGATGTTCATATCGAGACGT ATGAAAGTGAGCTGGTGATCCGCTTTCGAATTGACGGTGTGTTGAAGAAAGTTCTGACGCCACAGCGTCAACTGGCTTCC GTATTAGTATCGCGTATAAAGGTCATGTCAAAATTGGATATCGCGGAGAAGCGTGTTCCGCAAGACGGCCGAATTACGTT GAAAATTGCCGGGAGGGCGATTGACGTGAGGGTGTCTGTTATTCCCGTCAGCCATGGCGAAAGGGTGGTGATGCGTTTAC TGGATAAAGACAGCGTCAGTCTGGAACTGAGCGATCTTAATATGCAGAAATTATTACTTACCGCGTTGACTCGTTTAATG AATGAGCCGCACGGTATTATTCTTGTTACCGGCCCGACCGGTTCCGGAAAAAGTACCACGCTTTATTCGTTGCTCAATGA GATCAATGATGATAATCGCAATATTATGACGATTGAGGACCCGGTTGAATTTGAACTTAGTGGTATATCGCAGACTCAGG TTAATCCCAAAGTAGAGATGACTTTTGCGAAGGGCTTGCGTGCGCTGCTGCGGCAGGATCCTGATGTGCTGTTAATTGGC GAGATTCGTGATAAAGAAACCGCGCAAATAGCGGTACAGGCGTCTCTGACCGGTCACCTGGTGCTTTCCACCCTGCATAC GAATACGGCCGTTGGCGCGGTAACGCGGCTAAGGGATATGGGCGTAGAGCCTTTTCTCCTGGCGAGTTCTTTAAGCGGGA TATTATCACAGCGCTTGGTACGTAAGCTGTGTGGTCAATGTCGGCAGCCCTATACGCTTGGTAATGAGGAATGCCGGTTG CTGGCATTACCGGCGGATAAGCAGTATACCGCATGGCATGCGGTGGGGTGTGAAGACTGTAACGGCAGGGGATATCGCGG TCGTCTCGCTATTCATGAGTTATTGCTGATCAATGATGATATACGAAAAGCAATATATACAAAAAATAGTGAACAGGCGA TAGCGGCGTTATCTGCGGACTGGCCGACTTTGCGTCAGGATGGTGTCCGAAAGTTATTAGCAGGAGAGACCAGTTTCGAA GAGATCGTGCGCGTCACGGGGGACAGTGTCGATGGGCAGATTTAA Protein sequence : MTAGLHIPFNWAKQHGVVISEEPQGKTLWVSVEANPLAIAELARLIKTRCRMVKLESSEFDKMLLSTYQKGSGNAQKMMD DLGTDLDFYSLAEGLPEQQDLLDEKNDAPIIRLINAMFSEAIKERASDVHIETYESELVIRFRIDGVLKKVLTPQRQLAS VLVSRIKVMSKLDIAEKRVPQDGRITLKIAGRAIDVRVSVIPVSHGERVVMRLLDKDSVSLELSDLNMQKLLLTALTRLM NEPHGIILVTGPTGSGKSTTLYSLLNEINDDNRNIMTIEDPVEFELSGISQTQVNPKVEMTFAKGLRALLRQDPDVLLIG EIRDKETAQIAVQASLTGHLVLSTLHTNTAVGAVTRLRDMGVEPFLLASSLSGILSQRLVRKLCGQCRQPYTLGNEECRL LALPADKQYTAWHAVGCEDCNGRGYRGRLAIHELLLINDDIRKAIYTKNSEQAIAALSADWPTLRQDGVRKLLAGETSFE EIVRVTGDSVDGQI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-127 | 57 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-127 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D781_3846 | YP_007346225.1 | type II secretion system protein E (GspE) | VFG2048 | Protein | 2e-128 | 56 |
| D781_3846 | YP_007346225.1 | type II secretion system protein E (GspE) | VFG0182 | Protein | 1e-126 | 54 |
| D781_3846 | YP_007346225.1 | type II secretion system protein E (GspE) | VFG1876 | Protein | 9e-127 | 52 |
| D781_3846 | YP_007346225.1 | type II secretion system protein E (GspE) | VFG0112 | Protein | 7e-78 | 45 |
| D781_3846 | YP_007346225.1 | type II secretion system protein E (GspE) | VFG0233 | Protein | 2e-79 | 45 |
| D781_3846 | YP_007346225.1 | type II secretion system protein E (GspE) | VFG2426 | Protein | 1e-73 | 44 |
