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Name : D781_3845 (D781_3845) Accession : YP_007346224.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 4056459 - 4057670 bp Length : 1212 bp Strand : - Note : PFAM: Type II secretion system (T2SS), protein F; TIGRFAM: general secretion pathway protein F DNA sequence : ATGGGCAGATTTAAGTATCGCGTCTGCGATCGTGCTGGAAGGGTCATTCGAGGTACCCTTGAGGCAGACTCATTGCGCGT GGCGCGCCAGCAACTGCGTGAAAAACAGCTTACCGTGCTGAGTATCACATCCGTCGGCGACGGCGCATTTTCCAGATTGC TGAATTATCGGCAGCGGGTGCGAATTAGCCATGGGGATTTGGTGCTGTTCACTCGGCAACTGGCGACATTAAGTGCTGCA GCGATGCCTCTGGAAGAGGCATTGTATGTGGTAGGGCGACAAACTGAAAAAAAGAAGGTCGCTAATCTTATCATGAAGGT CCGCATTAGGGTCATGGAAGGCTTTTCTTTGGCTCAGAGCATGAAGCAATATCCTAATATTTTCGATCGGCTATTTTGCG CGATGATTGAAGCTGGGGAAGCGACAGGCCAGCTTGCATCTCTTTTGTATCGGCTTGCCGAATACGTGGAACGACAAAAG AAGTTAAAGAATAAAATTATTCATGCCATCACCTATCCTATTGTATTAACTGTGGTTGCAATTAGCGTAGTCAGTTTGTT ATTGACCATCGTCGTGCCTAAAGTTGTTGAGCAATTTATACATCTCAAACATGAGTTGCCGGTTACCACGCAGATTTTGA TCGCCAGCAGTGATTTTCTTAAACATTGGGGGGGAGGGATTATTTTAATTATAATTTCTTTCAGCTTGATATTTAATCAA TGGCTAAAAAAAAGTGCACGGCGCCTGGCATGGCATAAAACAATGCTCAGGATCCCAGTTGTTGGCTCTTTACAATTGAC ATTGAATACTGCGCATTACGCTAGCACGCTGAGTATTTTACATACCAGTTCGGTTCCGTTGCTTGAAAGTATGCGCATTA GTGCTTCTGTGTTGTCTAACGAATATGCACGTATGCAGCTTATTATGGCAATGGAAAGAGTCCGGGAAGGTGAATCTTTA AATAAGGCTTTGGAAAGCACGGCGCTTTTCTCACCGATGATGAAACATATGATTGCTTCCGGAGAGAGCAGCGGCGAGCT TGGTGACATGCTAAAACGGTCGGCGGAGATGCAGCAGGACGATCTTAACCAGAAGATAACGATGGCATTAAGCCTGTTTG AGCCGATGTTGGTGATAAGCATGGCAGGAATGGTGTTGTTTATTATTCTGGCGATAATGCAACCTATTCTTCAACTCAAC TCTTTAATCTGA Protein sequence : MGRFKYRVCDRAGRVIRGTLEADSLRVARQQLREKQLTVLSITSVGDGAFSRLLNYRQRVRISHGDLVLFTRQLATLSAA AMPLEEALYVVGRQTEKKKVANLIMKVRIRVMEGFSLAQSMKQYPNIFDRLFCAMIEAGEATGQLASLLYRLAEYVERQK KLKNKIIHAITYPIVLTVVAISVVSLLLTIVVPKVVEQFIHLKHELPVTTQILIASSDFLKHWGGGIILIIISFSLIFNQ WLKKSARRLAWHKTMLRIPVVGSLQLTLNTAHYASTLSILHTSSVPLLESMRISASVLSNEYARMQLIMAMERVREGESL NKALESTALFSPMMKHMIASGESSGELGDMLKRSAEMQQDDLNQKITMALSLFEPMLVISMAGMVLFIILAIMQPILQLN SLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-78 | 48 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-77 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D781_3845 | YP_007346224.1 | general secretion pathway protein F | VFG2049 | Protein | 2e-74 | 47 |
| D781_3845 | YP_007346224.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-67 | 44 |
| D781_3845 | YP_007346224.1 | general secretion pathway protein F | VFG1870 | Protein | 8e-63 | 41 |
