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Name : D781_3832 (D781_3832) Accession : YP_007346211.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Virulence Product : P pilus assembly protein, porin PapC Function : - COG functional category : - COG ID : - EC number : - Position : 4044857 - 4047412 bp Length : 2556 bp Strand : - Note : PFAM: Type VII secretion system (T7SS), usher protein; PapC C-terminal domain; PapC N-terminal domain DNA sequence : ATGAAGTTAAAGAAAATTTTAAATTCAGGGTATGTGGCCGGCGTATTTTTAGCGTTTTTGCCATTCTCTTCCACGCATGC GCGCGTATGGTCTTTTGATACCACGCAGCTTGCAGGTGATGAACAGAATGTGGATATCGCTATTTTTGAACAGGGAGGGC AGTTGCCCGGCAAATATTTTATCGATATCGTGCTAAACGGTGTGCACGTTGACTCGCGTGAAATGATTTTTCATATGGAG AAAGATGCCGAGGGCGCGCCGGTGCTAAAAACCTGTTTAACGCGGGCGCAATTGATTAGTTACGGCGTAAATGTTGACGC CTATGCTGCCCTTTTTGCGCCGTCGGACAATATGTCTGATCAGTGCGCGCGCCTATCGGTTATTCCACAGGCTACCGAAG TTTTTCAGTTTAATAGTCAGCAGCTGCAGCTGAGTATTCCTCAGGTTGCCATGTTGCCAAAATTGCGCGGCATTGCGCCG CCGGTGCTTTGGGATGATGGTGCTCCGGCATTCCTGATGAATTATCAGACCAATGTTACCCGCTCTGACTATCGCGGAGA TGGGCAGAAGCATAGTGATGCGCTGTTTGCCCGTGTTGATCCCGGCATCAATCTGGGGGCCTGGCGGCTGCGCAATATGA CGACGTTTCAAAAATCGGGAAACCGCCCGGGGAAGTGGCAAACGGTGGAGTCCTGGGCCGAACGCGGCTTGTATGGATTG CAGAGCCGGCTGACGCTGGGTGAACGTTATACGCCGTCAGATATTTTCAACAGCGTCCCTTTTCGCGGTGGGATGCTAGG GTCGGACGATTTAATGGTGCCTTACAACCAAAGGGATTTTGCGCCGGTCGTGCGGGGGATTGCACGTACTCAGGCACGGA TTGAGGTTCGTCAGGGCGGGTATGTCATCTACAGCAGCACGGTGGCGCCAGGTGCGTTTGCTCTTTCTGACCTGCCCGCC GGCAGCAATGGCGATCTTCAGGTCACGGTGTATGAAACGGACGGCCGGCCGCAGGTTTTTACCGTGCCCTGGAGCACACC GGCGATTGCATTACGCCAGGGATATCTGCGCTACAACCTGATGACAGGGCAGTACCACCCGGAAAACCGGGCGGTGAAGC AGGCTCCGGTCGTTCAGGCAACGGTCATGTATGGTTTGCCGTGGAATTTAACCGGCTACGGTGGGATGCAGTGGTCTGAA CACTACCAGGGCGCGGCGCTGGGACTGGGGGTTTTACTTGGCGATCTGGGCGCGTTGTCGCTTGATGGGATGCAGGGGTA TGGCGCAGAGCCTGAGGGTCGTCGTACGCAGGGGCAGACGTGGCGTTTTCGTTACAACAAAACGCTGGCGGCCACGAATA CCGGTATTTCGCTGGCTAGTAGTCAATATTCCGCTTCTGGGGGCCACTCAATGAATGAGGTGCTTGACCGTTGGCAGGAT AATGAATATGCCGCCGGCGGTCGTTTTCGCCGTTGGGACGATAGGCGCCGTAAAGCGCGGAGCGATGTGACAATTGGCCA GTCCTTCGACAATTTGGGATACCTGAACGTTAGCGCTTCACGTGAGAGTTACTGGGATAGCCCACAGACCAGAGATGAAG TGATGGCCTCTTGGAGCACGAGTGCCTGGGGGGTCAACTGGTCAGTCAACTGGACGCAACGCAAGCAGCCGGCCCGGGGG AATGCGGCATATGGGCGCCATTATCAGCGTGAACAGGAAGGCAGTTTATGGGTCAGCGTGCCATTGGAGCGCTGGACCGG CGGCAATGCCTACGCCACGTATCAGGCGCAGTCGAACAGCGATGGGCGTGTTCGTCATGAAGTGGGGCTGACCGGCAATG CCTTTGAACGGCAGCTTAACTGGAACGTGCGTCAGCAGCTTGAACAAGGCGGCGGCTACGATAGGCAAAATGGCGGGCTG GTTAATTTATCCTGGAACGGCGCTTACGGCGTGCTGAACGGCGGATACAGCTATAACAAAAACTCTCGCCAGAGTAATGC CGGTTTAGCGGGCGGGCTCGTTGTACATCAGCATGGTATTACCCTGGGGCAGCCTCTTGGGCGCACCACGGCGTTGGTTG CTGCGCCCGGCGTAGCCGGCGCATCGGTAGGCAGCTGGGCTGGCGTAAGGACCGATTCCCGTGGCTATGCGATGCAAACC GGCTTGACGCCTTATCAGGAAAATACCGTTGAACTGGATCCGCTTACCCTGCCGCAGGATGCGGAGGTACCGCAAACCGT CATGCGATTGGTACCGACGGAAGGCGCCGTTATCCCTGTCAGGTTTACGGCGCGTATCGGCGCCAGAGCGGTGGTTGCTT TACAGCAGTCGGATGGAAAATCGGTGCCATTTGGTGCGTTGGTGACGCTGGACGGAGAGCGTTCCACGGGCAGCGGCATT GTCGGCGAGGCCGGCCAGGTTTACCTAAGCGGCCTGCCTGATAGCGGTGAACTTGATGTGCGGTGGGGCGAGGGGAAACG GTGCCATGCGGCTTTCCAATTGCCGGAGAAAAAGGGCCCGGCCGGTATCTATAACTTACAGAGCCCGTGTCGTTGA Protein sequence : MKLKKILNSGYVAGVFLAFLPFSSTHARVWSFDTTQLAGDEQNVDIAIFEQGGQLPGKYFIDIVLNGVHVDSREMIFHME KDAEGAPVLKTCLTRAQLISYGVNVDAYAALFAPSDNMSDQCARLSVIPQATEVFQFNSQQLQLSIPQVAMLPKLRGIAP PVLWDDGAPAFLMNYQTNVTRSDYRGDGQKHSDALFARVDPGINLGAWRLRNMTTFQKSGNRPGKWQTVESWAERGLYGL QSRLTLGERYTPSDIFNSVPFRGGMLGSDDLMVPYNQRDFAPVVRGIARTQARIEVRQGGYVIYSSTVAPGAFALSDLPA GSNGDLQVTVYETDGRPQVFTVPWSTPAIALRQGYLRYNLMTGQYHPENRAVKQAPVVQATVMYGLPWNLTGYGGMQWSE HYQGAALGLGVLLGDLGALSLDGMQGYGAEPEGRRTQGQTWRFRYNKTLAATNTGISLASSQYSASGGHSMNEVLDRWQD NEYAAGGRFRRWDDRRRKARSDVTIGQSFDNLGYLNVSASRESYWDSPQTRDEVMASWSTSAWGVNWSVNWTQRKQPARG NAAYGRHYQREQEGSLWVSVPLERWTGGNAYATYQAQSNSDGRVRHEVGLTGNAFERQLNWNVRQQLEQGGGYDRQNGGL VNLSWNGAYGVLNGGYSYNKNSRQSNAGLAGGLVVHQHGITLGQPLGRTTALVAAPGVAGASVGSWAGVRTDSRGYAMQT GLTPYQENTVELDPLTLPQDAEVPQTVMRLVPTEGAVIPVRFTARIGARAVVALQQSDGKSVPFGALVTLDGERSTGSGI VGEAGQVYLSGLPDSGELDVRWGEGKRCHAAFQLPEKKGPAGIYNLQSPCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 2e-180 | 51 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 0.0 | 51 |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 2e-171 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D781_3832 | YP_007346211.1 | P pilus assembly protein, porin PapC | VFG0853 | Protein | 0.0 | 53 |
| D781_3832 | YP_007346211.1 | P pilus assembly protein, porin PapC | VFG0944 | Protein | 8e-178 | 52 |
| D781_3832 | YP_007346211.1 | P pilus assembly protein, porin PapC | VFG0849 | Protein | 2e-165 | 46 |
| D781_3832 | YP_007346211.1 | P pilus assembly protein, porin PapC | VFG0857 | Protein | 2e-165 | 46 |
| D781_3832 | YP_007346211.1 | P pilus assembly protein, porin PapC | VFG0419 | Protein | 2e-138 | 42 |
