Gene Information

Name : D781_3714 (D781_3714)
Accession : YP_007346100.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3925213 - 3925875 bp
Length : 663 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGAGAATTCTGCTGATTGAAGACGACAAGATTATCGGCGACGGCATCAAGGTCGGGCTGAGCCAGTTGGGCTTTACCCT
CGACTGGTTTAGCGACGGCAAGCTCGGCAAACAGGCGCTGGGCAGCGCGCCCTATGATGCGGTGATCCTCGATCTCAGCC
TGCCGGGCATCGACGGCCTCGATCTGCTGCGCGAATGGCGGCAGGCCGGCGAGGACGTGCCGGTGCTGATCCTGACCGCG
CGCGATGCGTTGTCGCAGCGGGTAGACGGCTTGCAGAGCGGCGCCGACGACTACCTGTGCAAGCCGTTTGCGCTGGCGGA
GGTGGCGGCGCGTCTGCAGGCGCTGATTCGCCGCCGTCACGGCCGGCTGAGCGCGCAGCTGACGCACGGCCGGCTGGTGT
TCGACACCGCGGCGCGCAGCGTCACGCTGGACGGCGCGCTGGTGACGCTGACGCCGCGCGAGCTGGCGGTGCTGGAGCTG
TTTTTACATAACAAGGGGCGGGTGCTGGCGCGGCCGCTGATTCAGGAAAAGCTGTACAGCTGGGACGATGAGGTGAGCAG
TAACGCGGTGGAGGTGCATATCCACCACCTGCGCCGCAAGCTGGGCAACGGCTTTATCCGCACGGTGCACGGCGTGGGCT
ACACGCTGGGGGACGCCGAGTGA

Protein sequence : 
MRILLIEDDKIIGDGIKVGLSQLGFTLDWFSDGKLGKQALGSAPYDAVILDLSLPGIDGLDLLREWRQAGEDVPVLILTA
RDALSQRVDGLQSGADDYLCKPFALAEVAARLQALIRRRHGRLSAQLTHGRLVFDTAARSVTLDGALVTLTPRELAVLEL
FLHNKGRVLARPLIQEKLYSWDDEVSSNAVEVHIHHLRRKLGNGFIRTVHGVGYTLGDAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-33 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3714 YP_007346100.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 2e-38 46
D781_3714 YP_007346100.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 4e-25 42
D781_3714 YP_007346100.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002516.2.879194.p Protein 3e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3714 YP_007346100.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 7e-35 45
D781_3714 YP_007346100.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-27 41
D781_3714 YP_007346100.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 5e-26 41
D781_3714 YP_007346100.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 1e-25 41