Gene Information

Name : D781_3634 (D781_3634)
Accession : YP_007346022.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3838418 - 3839938 bp
Length : 1521 bp
Strand : -
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGTCTGAGCAACAACCACAGAGCGCCGATCAGGCGTCGGATCTCAATAACGAGCTGCAGTCACGCCGTGAAAAACTGGC
GGCGCTGCGCGAGAACGGCATTGCGTTCCCGAATGATTTCCGTCGTGACACCACGTCCGACAAGCTGCACGCAGCATATG
ATGATAAAGACAACGAAGAGCTGGAAGCGCTGGGCGTAGAAGTGACCGTCGCCGGGCGTATGATGACCCGCCGCATTATG
GGCAAAGCCTCTTTCGTCACGCTGCAGGACGTTGGCGGCCGCATTCAGCTGTACGTCGCGCGCGACGATCTGGCGGAAGG
CGTGTACAACGAACAGTTCAAGAAGTGGGACCTGGGCGATATTCTCGGCGCGCGCGGCAAGCTGTTTAAAACCAAAACCG
GCGAGCTGTCGATTCACTGCACCGAGCTGCGTCTGCTGACCAAGGCGCTGCGCCCGCTGCCAGACAAGTTCCACGGCCTG
GCCGATCAGGAAACCCGCTATCGTCAGCGCTACCTGGATCTGATTGCCAACGAAGAATCACGTCACACCTTCAAGGTGCG
TTCCCGCATCATGTCCGGCATCCGCAACTTTATGGTGGGCCGCGACTTTATGGAAGTGGAAACCCCGATGATGCAGGTGA
TCCCAGGCGGCGCGTCCGCGCGTCCGTTTATTACTCACCACAATGCGCTGGACATCGATATGTACCTGCGTATTGCGCCG
GAGCTGTATCTGAAGCGTCTGGTGGTTGGTGGTTTTGAGCGCGTGTTCGAGATCAACCGCAACTTCCGTAACGAAGGCGT
ATCGCCGCGTCACAACCCAGAGTTCACCATGATGGAACTCTATATGGCGTACGCGGATTACAAAGATCTGATTGAGCTGA
CCGAGTCGCTGTTCCGCACGCTGGCGCAGGACGTACTGGGCACCACCAAGGTGCCGTACGGCGATGAAGAGTTCGACTTC
GGCAAGCCATTCGAAAAACTGACCATGCGCGAGGCGATCAAGAAGTATCGTCCTGAAACCGACATGGCGGACCTGGATGA
CTTCGACAAGGCGAAGGCGATTGCCGAGTCTATCGGCATCAAGGTAGAGAAGAGTTGGGGTCTGGGCCGCATAGTGACCG
AGATCTTTGAAGAGACGGCGGAAAGCCATCTGATTCAACCAACCTTCATCACCGAATACCCGGCGGAAGTTTCCCCGCTG
GCGCGTCGTAACGATGAGAACCCGGAAATTACCGACCGCTTTGAGTTCTTCATCGGCGGCCGTGAAATCGGTAACGGCTT
CTCCGAGCTGAATGATGCGGAAGACCAGGCGCAGCGCTTTGCTGACCAGGTTGCCGCGAAGGATGCCGGCGATGACGAAG
CGATGTTCTACGACGAAGACTACGTGACCTCTCTGGAACACGGCCTGCCGCCGACGGCTGGCCTGGGCATCGGTATCGAC
CGTATGGTTATGCTGTTCACCAACAGCCATACCATCCGCGATGTTATCCTGTTCCCGGCGATGCGTCCGACTGCCAAGTA
A

Protein sequence :
MSEQQPQSADQASDLNNELQSRREKLAALRENGIAFPNDFRRDTTSDKLHAAYDDKDNEELEALGVEVTVAGRMMTRRIM
GKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
ADQETRYRQRYLDLIANEESRHTFKVRSRIMSGIRNFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTKVPYGDEEFDF
GKPFEKLTMREAIKKYRPETDMADLDDFDKAKAIAESIGIKVEKSWGLGRIVTEIFEETAESHLIQPTFITEYPAEVSPL
ARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFADQVAAKDAGDDEAMFYDEDYVTSLEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPTAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-170 69
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 1e-93 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3634 YP_007346022.1 lysyl-tRNA synthetase (class II) VFG1668 Protein 2e-170 69