Gene Information

Name : D781_3603 (D781_3603)
Accession : YP_007345992.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : P pilus assembly protein, chaperone PapD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3806671 - 3807345 bp
Length : 675 bp
Strand : -
Note : PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain

DNA sequence : 
ATGAAAGTTTGGCAGAGTGCGCTGGTCGCAGCGCTATTGATGACTATGGGGGCTCAGGCCCAGGCTGGTGTGATCATCGG
TGGGACGCGCGTGGTATACGACGGTGGGAAAAAAGAATCCTCTCTGAGCATCAGCAATCCAGACAAGGTGCCGTATTTGG
TTCAGTCTTGGATTGATGCCGGCGAAAACAGCGCCGTTAAGGCACCGTTCGTGATTACTCCTCCTTTATTCCGTCTGGAC
GATGGACAAAATAATATCCTGCGCATAGTGCGAGCCGGTGGTGCGTTGCCGGAAGATAAAGAGTCTTTGTATTGGGTCAA
TATCAAATCGATCCCTTCCGCACCGAAACAGGATAATACGCTGCAAATTGCGGTGAAAACGCGTATCAAGCTGATTTACC
GGCCACGGGGTCTGGAGGGAACGCTGAATGATGCCGCGCAAAAGGTGTCATGGCAGCGTAATGGCAATGCCTTGCAGGTT
TCCAATCCCTCGCCTTATTACCTCACTTTTTTTGACGTTAAAGTCAATGGTGTAGCGGTAAAAGACGCCACGATGGTTGC
TCCGCGTTCCAGTGCGCGTTTCACCTTGCCGTCAGGTAATTCCGGCGGTGCATTGACTTGGAAAATTATTAACGACTTTG
GTGGGGCCAGTAAAGCGTTCACGGCCAATTTATAA

Protein sequence : 
MKVWQSALVAALLMTMGAQAQAGVIIGGTRVVYDGGKKESSLSISNPDKVPYLVQSWIDAGENSAVKAPFVITPPLFRLD
DGQNNILRIVRAGGALPEDKESLYWVNIKSIPSAPKQDNTLQIAVKTRIKLIYRPRGLEGTLNDAAQKVSWQRNGNALQV
SNPSPYYLTFFDVKVNGVAVKDATMVAPRSSARFTLPSGNSGGALTWKIINDFGGASKAFTANL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 4e-37 43
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 1e-36 42
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 7e-32 42
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 7e-32 42
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 5e-37 42
phfC AAO17171.1 PhfC Virulence tcd island Protein 4e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3603 YP_007345992.1 P pilus assembly protein, chaperone PapD VFG1644 Protein 2e-37 43
D781_3603 YP_007345992.1 P pilus assembly protein, chaperone PapD VFG0911 Protein 2e-37 43
D781_3603 YP_007345992.1 P pilus assembly protein, chaperone PapD VFG0445 Protein 2e-34 43
D781_3603 YP_007345992.1 P pilus assembly protein, chaperone PapD VFG0455 Protein 9e-37 43
D781_3603 YP_007345992.1 P pilus assembly protein, chaperone PapD VFG0875 Protein 1e-34 41
D781_3603 YP_007345992.1 P pilus assembly protein, chaperone PapD VFG0943 Protein 2e-28 41