Gene Information

Name : D781_3509 (D781_3509)
Accession : YP_007345904.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : cadaverine:lysine antiporter, APA family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3701887 - 3703230 bp
Length : 1344 bp
Strand : -
Note : PFAM: Amino acid permease; TIGRFAM: transporter, basic amino acid/polyamine antiporter (APA) family; TC 2.A.3.2.2

DNA sequence :
ATGGCTTCATCCAAGAAAATTGGGCTTATTGCCTGTACCGGCGTAGTCGCCGGTAATATGATGGGGAGCGGGATTGCATT
ATTACCCGCGAACCTGGCTAGCCTCGGCGGTATCGCCATATGGGGATGGGTAATCTCTATTATTGGCGCCATGTCTTTAG
CCTATGTCTATGCCCGCCTCGCCACCAAAAATCCACAGGAAGGCGGCCCCATTGCCTACGCAGGGGAAATTTCTCCGGCG
TTTGGCTTCCAAACCGGCGTGCTTTATTACCATGCCAACTGGATTGGTAATTTAGCCATCGGCATTACCGCCGTTTCTTA
CCTTTCCACCTTCTTCCCCGCCCTGAATAACCCGATTCCGGCAGGCATCGCCTGTATCGCCATTGTTTGGGTCTTTACCT
TTGTGAATATGCTTGGCGGTACCTGGGTCAGCCGTCTGACCACCATTGGGCTGGTACTGGTGCTGATCCCGGTAATTGTG
ACCGCCGTTGCCGGCTGGCATTGGTTTGACATCGCCACCTATCACGCCAACTGGAACACCTCCGGCACCACCGACAGCCA
TGCGGTGATTAAAAGTATCCTGCTGTGCCTGTGGGCCTTTATCGGGGTGGAATCCGCCGCCGTCAGCACCGGCATGGTGA
AAAATCCAAAACGCACCGTGCCGCTGGCCACCATGCTGGGCACCGCGTTGGCCGGCATTATCTACATCGCCGCGACGCAG
GTGATGAGCGGTATGTTCCCCGCCAGCCAAATGGCCGCCAGCGGCGCGCCGTTCGCCGTCAGCGCCTCCGCCATTATGGG
CAACTGGGCCGCACCGATGGTGTCCGCCTTTACCGCGTTCGCCTGCCTGACCTCGCTGGGGTCGTGGATGATGCTGGTGA
GCCAGGCCGGGGTGCGCGCCGCCCATGACGGCAACTTCCCGAAAGTGTACGGCGAGCTGGATAAAAACGGTATTCCGAAA
AAAGGCCTGCTGTTGGCCAGCTGCAAAATGACCGCGCTGATGGTGTTGATCACCGTGATGAGCTCCAGCGGCGGCAAGGC
ATCCGACCTGTTTGCCGAACTGACCGGTATCGCGGTGCTGCTGACCATGCTGCCTTACTTCTACTCCTGCGTGGATTTGA
TCCGCTTTGAAGGCGTTAACGTACGCAACCTGCTGAGCCTGATTGCTTCCGTCTGCGGCTGTGGCTTCTGCTTTATCGCG
CTGATGGGCGCCAACTCCTTCGAACTGTCCGGCACCTTTATCGTCAGCCTGATCATCCTGATGTTCTACGCCCGGAAAAT
GAACACCCGTCAGGTCGCCAAACAGGCGGCTATCGAAGACAGCACCGCGGCGAAAGCACACTAA

Protein sequence :
MASSKKIGLIACTGVVAGNMMGSGIALLPANLASLGGIAIWGWVISIIGAMSLAYVYARLATKNPQEGGPIAYAGEISPA
FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPALNNPIPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVIV
TAVAGWHWFDIATYHANWNTSGTTDSHAVIKSILLCLWAFIGVESAAVSTGMVKNPKRTVPLATMLGTALAGIIYIAATQ
VMSGMFPASQMAASGAPFAVSASAIMGNWAAPMVSAFTAFACLTSLGSWMMLVSQAGVRAAHDGNFPKVYGELDKNGIPK
KGLLLASCKMTALMVLITVMSSSGGKASDLFAELTGIAVLLTMLPYFYSCVDLIRFEGVNVRNLLSLIASVCGCGFCFIA
LMGANSFELSGTFIVSLIILMFYARKMNTRQVAKQAAIEDSTAAKAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 7e-167 86
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 1e-166 86
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 2e-137 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3509 YP_007345904.1 cadaverine:lysine antiporter, APA family VFG1671 Protein 1e-137 69