Gene Information

Name : D781_3508 (D781_3508)
Accession : YP_007345903.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : arginine/lysine/ornithine decarboxylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3699650 - 3701791 bp
Length : 2142 bp
Strand : -
Note : PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal domain

DNA sequence :
ATGAACGTTATTGCCATCATGAATCACATGGGCGTCTACTTCAAAGAAGAGCCGATCCGTGAGCTGCATCAGGCGCTGGA
AACGCTGGGCTTCCGCCTGGTTTACCCCAACGACCGCGCCGATCTGCTGAAGCTGATTGAAAACAACGCCCGCCTGTGCG
GCGTCATCTTCGACTGGGACAAATACAACCTGGAACTGTGTGAAGAAATCAGCCAGCTCAATGAATATATGCCGCTGTAT
GCCTTCGCCAACACCTATTCGACGCTGGACGTCAGCCTGAACGATCTGCGTATGCAGGTGCGCTTCTTCGAGTATGCGTT
AGGCGCAGCGCAGGACATCGCCGCCAAGATCAAGCAGAACACCGATGAGTATATCGACCGCATTATGCCGCCGCTGACCA
AGGCGCTGTTCAAATACGTCCGCGAAGGGAAGTACACCTTCTGCACGCCGGGCCATATGGGCGGCACCGCCTTCCAGAAA
AGCCCGGTCGGCAGCCTGTTCTATGATTTCTTCGGCCCGAACACCATGAAGTCCGACATTTCGATTTCCGTTTCGGAGCT
GGGATCGCTGCTGGATCACTCCGGCCCGCATAAAGAAGCGGAAGAGTATATTTCCCGCGTCTTCAACGCCGAGCGCAGTT
TTATGGTGACCAATGGCACCTCAACGGCGAACAAAATCGTCGGCATGTACTCCGCACCGGCGGGCAGCACGGTGCTGATT
GACCGTAACTGTCACAAATCGCTGACGCACCTGATGATGATGAGCGACATTACGCCTATCTACTTCCGTCCGACCCGTAA
CGCCTACGGTATTCTCGGCGGTATTCCGCAGAGCGAGTTCAGCCGCGCCACCATCGCCAAACGGGTGAAAGATACGCCGA
ACGCCAGCTGGCCGGTGCATGCGGTCATCACCAACTCCACCTATGACGGCCTGCTGTACAACACCGACTTTATCAAGAAC
ACGCTGGACGTGAAGTCGATTCACTTTGACTCCGCCTGGGTGCCTTACACCAACTTCCACCCGATTTATCAAGGTAAATG
CGGGATGAGCGGCGACCGCGTGGAAGGCAAGGTGATTTATGAAACCCAGTCCACCCACAAACTGCTGGCGGCATTCTCGC
AGGCGTCGATGATTCATGTGAAAGGCGATATCAACGAAGAGACCTTCAACGAAGCCTACATGATGCATACCACCACCTCG
CCGCACTATGGCATCGTGGCGTCCACCGAAACCGCGGCGGCGATGATGAAAGGCAATGCCGGTAAGCGCCTGATTGAAGG
TTCCGTTGAGCGTGCGATCAAGTTCCGTAAAGAGATCAAGCGGCTGAAAGTCGAGTCCGACGGCTGGTTCTTCGACGTCT
GGCAGCCTGAGCATATCGACGAGGCCGAATGCTGGCCGCTGCGTTCCGACAGCGCCTGGCACGGTTTCAAAAACATCGAT
AACGAACATATGTACCTCGACCCGATCAAGGTCACCATCCTGACGCCGGGGATGAGCAAAGAGGGTGAGATGCAGCCGTT
CGGTATTCCTGCCAGCATCGTGGCGAAATATCTGGATGAGCACGGCATTATCGTTGAAAAAACCGGGCCGTATAACCTGC
TGTTCCTGTTCAGCATCGGTATCGATAAAACCAAGGCGCTGAGCCTGCTGCGCGCCCTGACCGAATTCAAACGCGCGTTT
GACCTGAACCTGCGGGTGAAAAACATGCTGCCATCGCTGTATCAGGAAGCACCTGAGTTTTATGAAGAGATGCGCATTCA
GGATCTGGCGCAGAATATTCACCGCCTGGTTGAGCAGCACAATCTGCCGGATCTGATGTACCGCGCGTTTGAAGTGTTGC
CAAGCATGGTGATGAACCCGTATCAGGCCTTCCAGAAAGAGCTGCACGGCGAGGTGGAAGAGGTGTACCTGGAGGAGATG
ATCGGCAAGGTGAATGCCAACATGATCCTGCCATACCCACCGGGCGTACCGCTGGTGATGCCGGGCGAGATGCTGACCGA
AGAGAGCCGTCCGGTCCTGGAGTTCCTGCAGATGCTGTGCGAAATCGGCGCGCATTATCCGGGCTTTGAGACCGATATCC
ACGGCGCCTACCGTCAGGCGGACGGGCGTTACACCGTGAAGGTGCTGAAAAACGAGAAATAA

Protein sequence :
MNVIAIMNHMGVYFKEEPIRELHQALETLGFRLVYPNDRADLLKLIENNARLCGVIFDWDKYNLELCEEISQLNEYMPLY
AFANTYSTLDVSLNDLRMQVRFFEYALGAAQDIAAKIKQNTDEYIDRIMPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
SPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYISRVFNAERSFMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFSRATIAKRVKDTPNASWPVHAVITNSTYDGLLYNTDFIKN
TLDVKSIHFDSAWVPYTNFHPIYQGKCGMSGDRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTS
PHYGIVASTETAAAMMKGNAGKRLIEGSVERAIKFRKEIKRLKVESDGWFFDVWQPEHIDEAECWPLRSDSAWHGFKNID
NEHMYLDPIKVTILTPGMSKEGEMQPFGIPASIVAKYLDEHGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTEFKRAF
DLNLRVKNMLPSLYQEAPEFYEEMRIQDLAQNIHRLVEQHNLPDLMYRAFEVLPSMVMNPYQAFQKELHGEVEEVYLEEM
IGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKNEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 91
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3508 YP_007345903.1 arginine/lysine/ornithine decarboxylase VFG1670 Protein 0.0 67