Gene Information

Name : D781_3430 (D781_3430)
Accession : YP_007345833.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3617299 - 3618540 bp
Length : 1242 bp
Strand : +
Note : PFAM: Domain of unknown function (DUF4102); Phage integrase family

DNA sequence : 
ATGGCAAGAAAAACCAAGCCGTTAACAGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGTTGTATGA
TGGTGACGGGCTTACTCTGCTAATCAAGTCCAGCGGTAGCAAGCTCTGGCAGTTCCGTTACTATCGACCACTGACAAAGC
AGCGAACCAAACAGAGCTTTGGTGCCTACCCTGCCGTCTCACTTTCTGATGCGCGTAAACTCAGAGCTGAATCTCGAGTT
TTGTTGGCGAAAGACATTGATCCTCAGGAACATCAGAAAGAACAGGTAAGAAATTCTCAAGAGGCTAAAACCAACACTTT
CCTGTTAGTTGCCGAGCGTTGGTGGAATGTGAAGAAAACCAGCGTAACAGAGGACTATGCCGACGATATCTGGCGCTCGC
TTGAGAGAGATGTTTTCCCTGCAATCGGTGATATCAGTGTCACTGAGATTAAGGCTCATACTCTGGTTAAAGCAGTTCAG
CCGGTTCAGGCTAGAGGGGCATTAGAGACTGTTCGCCGCCTTTGTCAGCGTATTAATGAAGTCATGATTTATGCGCAGAA
CACGGGCCTGATTGATGCGGTTCCCAGCGTAAACATCGGGAAAGCATTCGAGAAACCGCAAAAGAAAAACATGCCAAGCA
TCCACCCGGGGCAACTTCCACTATTAATGAAGACGATGCGGATGGCAAGTATCAGCCTGTCCACAAGATGCCTGTTTATG
TGGCAGCTTCTCACCATCACCCGCCCTGCCGAAGCCGCTGAAGCTCGCTGGGATGAGATCGATTTTGATACTAGCGAATG
GAAAATTCCAGCAGCCCGAATGAAGATGAACCGGGACCATACGGTTCCACTATCCAATGAGGCTCTCTCTATTCTGGAAA
TGATGAAGTCACTCAGTGGTGACCGAGAATTTATCTTTCCCAGTCGCATTAAGCCTACCCAGCCGATGAACAGCCAGACA
GTGAATGCAGCCCTTAAGCGTGCTGGCTTAGGGGGCGTTCTCGTATCACACGGTTTACGTTCTATCGCTAGTACGGCACT
CAATGAGGAAGGATTTCCTTCTGATGTCATTGAAGCAGCACTGGCGCATGTAGACAAAAATGAGGTACGTCGCGCTTACA
ACCGCAGTGATTACCTTGAGCAACGGCGACCGATGATGCAGTGGTGGGCTGATTTTGTAATGGCAGCAGACAATGAAAGT
CAAATTGAACCTGGAATAAAAGGAATGAGGTTCGTTTTATGA

Protein sequence : 
MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESRV
LLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQ
PVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIHPGQLPLLMKTMRMASISLSTRCLFM
WQLLTITRPAEAAEARWDEIDFDTSEWKIPAARMKMNRDHTVPLSNEALSILEMMKSLSGDREFIFPSRIKPTQPMNSQT
VNAALKRAGLGGVLVSHGLRSIASTALNEEGFPSDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFVMAADNES
QIEPGIKGMRFVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20773.1 integrase Not tested VPI Protein 9e-106 53
int AAK20803.1 integrase Not tested VPI Protein 9e-106 53
unnamed AAA82714.1 integrase Not tested VPI Protein 9e-106 53
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 1e-105 53
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 1e-105 53
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 1e-104 51
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 4e-82 46
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 4e-82 46
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-82 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3430 YP_007345833.1 Integrase VFG1092 Protein 2e-82 46