Gene Information

Name : D781_3212 (D781_3212)
Accession : YP_007345621.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3378966 - 3379769 bp
Length : 804 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAATACTGTAACGCCGCTGTCCGCGCCGCTGCGCGCCGAAAACCTGACGCTGGGCTATGACAAAAAAATCGTGGCAAG
CGACCTGTCCGTCGCCATTCCCCACGGCGAGTTGACGGTCATTATCGGCCCCAACGCCTGTGGCAAGTCGACGCTGCTGC
GCACCCTCAGCCGCCTGATGCAGCCGCAGCAGGGGCAGGTATGGCTGAACGACAAACCCATCCGCGACTATGCCACCAAA
GAGGTGGCGCGCCAGCTCGGGCTGCTGCCGCAAACGTCGGTCGCCCCCGGCGACATTACCGTGTTCGATCTGGTAGCCCG
CGGCCGCTATCCGCATCAGCGCCTGTTCAGCCGCTGGCGGGAAGAGGATCAGCAGGCGGTGGAAGACGCCATGCGCGCCA
CCGGCGTGGCGGAGCTGGCGGAACAGGCGGTCGATACGCTCTCCGGCGGACAGCGTCAGCGCGTCTGGATCGCCATGGTG
CTGGCGCAGCAAACGCCGCTGCTGCTGCTGGATGAGCCGACCACCTGGCTGGATATCACCCACCAGATCGAACTGCTGGA
GCTGATGCGCCAGCTGAACCGCGAGCGCGGCCATACGCTGGTGGTGGTGCTGCACGATCTGAACCACGCCTGCCGCTACG
CCACCCACCTGATCGCCATGCGCGGCGGGAAGGTGATCGCCGAAGGCGCGCCGAAAGATATCGTCACGCCGCAGCTGATC
GAGGAGGTGTACGGCCTGAAATGCATGATCATTGACGATCCGGTGTCGCATACTCCGCTGGTGGTGCCGTTGGGTAAGCC
CTAA

Protein sequence : 
MNTVTPLSAPLRAENLTLGYDKKIVASDLSVAIPHGELTVIIGPNACGKSTLLRTLSRLMQPQQGQVWLNDKPIRDYATK
EVARQLGLLPQTSVAPGDITVFDLVARGRYPHQRLFSRWREEDQQAVEDAMRATGVAELAEQAVDTLSGGQRQRVWIAMV
LAQQTPLLLLDEPTTWLDITHQIELLELMRQLNRERGHTLVVVLHDLNHACRYATHLIAMRGGKVIAEGAPKDIVTPQLI
EEVYGLKCMIIDDPVSHTPLVVPLGKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-63 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-65 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-65 51
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-65 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-65 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-52 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-64 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-64 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-54 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-55 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-55 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-55 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-55 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3212 YP_007345621.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component BAC0164 Protein 8e-53 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_3212 YP_007345621.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG0925 Protein 6e-96 70
D781_3212 YP_007345621.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG1042 Protein 8e-53 49