Gene Information

Name : D781_2794 (D781_2794)
Accession : YP_007345230.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : type VI secretion protein, VC_A0110 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2940498 - 2942384 bp
Length : 1887 bp
Strand : +
Note : PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family

DNA sequence :
ATGGACAGTAAACTGTTAGAGTATTACAACCGCGAACTGGCCTATCTGCGCGAGATGGGCGCGGAATTCGCCGAGCAGTA
CCCGAAGGTCGCCGGGCGTCTGGGCATGCGCGGCATCGACGTGGCGGATCCCTATATTGAGCGGCTGATGGAGGGCTTCG
CCTTCCTGACCTCGCGCGTACAGCTGAAGATGGACGCGGAATTTCCGCGTTTCTCCCAGCGGCTGCTGGAAATTATCTAT
CCGAACTACCTGTCGCCCACGCCGTCGATGGCGATAGCCGAGCTGCAGCCGGACAGCAGCAAAGGCGACATCAGCAACGG
TTTTACCGTTCCGCGCGGCACCATGATGGACAGCCAGACGCTGAAGAAGAACGGCATCACCTGCAGCTACACCACCGCCC
ACGACGTCACGCTGCAGCCGGTGCGGCTGAAAAGCGTGGAGCTGGGCGGCATTCCGGCCGATATTCCGTTCTCCTCCCTC
GGGCTGCAAAACCGCGGCTGCGTCAGCGCGCTGCGCATCCGGCTCGAGTGCTACGACAGCGTTACGCTGAACAGTCTGGA
TCTCGACAACCTGATGTTCTACCTCTCCGGGCCGGACATGCAGGCGCAGCAGCTGCTGGAACTGCTGATGCAGCACAGCG
TCGGCATGCTGTGCCAGACGGTGGAGCCGCAGCCGCAGCGGCGCGTGCTGGCGGATGACGCGCTGCGTCAGGAGGGCTTT
GCCCCGGAACAGGCGCTGCTGCCGAACGACCTGCGCAACTTCGACGGCTACCGCCTGCTGCAGGAATACTTCGCCTTCCC
GGCGCGCTTCCAGTTCTTCAGCATCAGCGGCCTGCAGCCGCTGCTGCGCAGCGTGCGCGAAAGCAAAAAAACGCTGCGTC
AGTTTGAGATCGTGGTGCTGCTGGACCGGCACGACGCCGCGCTGGAGCGGGTGATCGACGTCAGCCACCTGGCGCTGCAC
TGCACGCCGGTGATCAACCTGTTCCCGAAAGTGGCCGAACGCATCACCCTTAACGAAAAAAATCATGAATACCACCTGGT
GGTCGATAATATCCGTCCGTTGGATTATGAGGTGTTCTCGGTGCAACGGCTGGGCGGCAGCGCCAGCGAAAAACGCTACG
AACAGGAGTTCCGGCCGTTTTACAGCACGCTGAGCGAAGATGACGGCAACTACGGCGCCTACTTCTCGCTGCGGCGCGAA
CAGCGCACCCTCTCCTCCCACGCCCGGCGCTACGGCACCCGCACCGGCTATGTCGGTTCCGAAGTGTTCGTCTCGCTGGT
GGATGAGCGCCAGTCGCCCTGGCACAGCGATCTGAAATACCTGACGGCCGACGTGCTGTGCACCAGCCGCGATCTGCCGC
TGATGCTGATGCAGCAGGATCAGGGCAACTTTGTGATGCCGGACTCCATCCCGATCAAGCGGGTGTTCCTGCGTAAAGGG
CCGACGCCGCCGCGCCCGGCGCTGGCGGAAGGCATGATCACCTGGCGGCTGATCAGCCAGCTGCAGCTTAACTACCTGAG
CCTGATGGACGGCGATCCGGAACAGGGCGCGGCCAGCCTGCGTCAGCTGCTCGGCCTGTACGGCAACCTGAGCGAGCCGG
CGATCGCCAAACAGATCCAGGGCGTGCGCAGCTGCAACCTGCGGCCGGTGTACCGCCGGGTGCCGGAGCCGGGGCCGATC
GTGTTCGCCCGCGGCATCGCCATCGATCTCACCGTCGACGATCAGGCGTTCTCCGGCAACAGCCCTTATCTGCTCGGCAG
CGTGCTGGAACGGCTGTTCTCACGGCTGGTGGCGATGAATACCTTTACCGAAATGACGCTGTCCAGCCAGCAGCGCGGTG
AAATCGCCCACTGGCAGGCGCGCATGGGCAAAAGGACGCTAATATGA

Protein sequence :
MDSKLLEYYNRELAYLREMGAEFAEQYPKVAGRLGMRGIDVADPYIERLMEGFAFLTSRVQLKMDAEFPRFSQRLLEIIY
PNYLSPTPSMAIAELQPDSSKGDISNGFTVPRGTMMDSQTLKKNGITCSYTTAHDVTLQPVRLKSVELGGIPADIPFSSL
GLQNRGCVSALRIRLECYDSVTLNSLDLDNLMFYLSGPDMQAQQLLELLMQHSVGMLCQTVEPQPQRRVLADDALRQEGF
APEQALLPNDLRNFDGYRLLQEYFAFPARFQFFSISGLQPLLRSVRESKKTLRQFEIVVLLDRHDAALERVIDVSHLALH
CTPVINLFPKVAERITLNEKNHEYHLVVDNIRPLDYEVFSVQRLGGSASEKRYEQEFRPFYSTLSEDDGNYGAYFSLRRE
QRTLSSHARRYGTRTGYVGSEVFVSLVDERQSPWHSDLKYLTADVLCTSRDLPLMLMQQDQGNFVMPDSIPIKRVFLRKG
PTPPRPALAEGMITWRLISQLQLNYLSLMDGDPEQGAASLRQLLGLYGNLSEPAIAKQIQGVRSCNLRPVYRRVPEPGPI
VFARGIAIDLTVDDQAFSGNSPYLLGSVLERLFSRLVAMNTFTEMTLSSQQRGEIAHWQARMGKRTLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 1e-128 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_2794 YP_007345230.1 type VI secretion protein, VC_A0110 family VFG2074 Protein 7e-137 47