Gene Information

Name : D781_2730 (D781_2730)
Accession : YP_007345166.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2880761 - 2881549 bp
Length : 789 bp
Strand : +
Note : PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP

DNA sequence :
ATGAATGCATCCCAACGCCCGTCCCCTGCGTCGCCGACGCGTCCCGCCCGTCCGATCCGCCGCTGCGCGCCCGCGCTGAC
CGCCCTGCTGCTGGTCAGCCCGGCGGCGCTGGCGCAGCTGCCGGGCCTTATCAGCCAGCCGCTCGCCGGCGGCGGCCAGA
GCTGGTCGCTGCCGGTGCAGACGCTGGTGCTGCTGACCTCGCTGACCTTCCTGCCGGCGATGCTGCTGATGATGACCAGC
TTTACCCGCATCATTATCGTGCTGGGCCTGCTGCGCAACGCGCTGGGCACCCCCTCCGCACCGCCGAACCAGGTGATGCT
GGGGCTGACGCTGTTTCTGACCTTCTTTATCATGTCGCCGGTGTTCGACAAGGTGTATCAGGATGCCTACCTGCCGTTCA
GCCAGGACAAAATCGCGCTCGACGTCGCCATGGAAAAGGGGGCGCAACCGCTGCGCGAATTTATGCTGCGTCAGACGCGG
GAAACCGATCTGGCGCTGTACGCCCGGCTGGCCCATCAGCCGCCGCTGGCCGGCCCGGAGGCGGTGCCGATGCGCATCCT
GCTGCCGGCCTACGTCACCAGCGAGTTAAAAACCGCCTTCCAGATCGGCTTTACGGTATTTATTCCGTTTTTGATTATCG
ATCTGGTGGTGGCCAGCGTGCTGATGGCGCTGGGGATGATGATGGTGCCGCCGGCCACCATCTCGCTGCCGTTCAAACTG
ATGCTGTTTGTGCTGGTCGACGGCTGGCAGCTGCTGCTGGGTTCACTGGCGCAGAGTTTCTATTCCTGA

Protein sequence :
MNASQRPSPASPTRPARPIRRCAPALTALLLVSPAALAQLPGLISQPLAGGGQSWSLPVQTLVLLTSLTFLPAMLLMMTS
FTRIIIVLGLLRNALGTPSAPPNQVMLGLTLFLTFFIMSPVFDKVYQDAYLPFSQDKIALDVAMEKGAQPLREFMLRQTR
ETDLALYARLAHQPPLAGPEAVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKL
MLFVLVDGWQLLLGSLAQSFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-28 44
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-26 44
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-26 44
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-26 44
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 3e-20 41
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 3e-20 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-30 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 3e-21 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 3e-21 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 7e-30 41
escR AAK26700.1 EscR Virulence LEE Protein 4e-31 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 2e-30 41
escR AAL57527.1 EscR Virulence LEE Protein 4e-31 41
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 5e-31 41
escR CAC81847.1 EscR protein Virulence LEE II Protein 4e-31 41
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 5e-31 41
escR CAI43889.1 EscR protein Virulence LEE Protein 4e-31 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 4e-31 41
escR AAC31528.1 L0049 Virulence LEE Protein 3e-31 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 4e-31 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 3e-31 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-28 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_2730 YP_007345166.1 flagellar biosynthetic protein FliP VFG2338 Protein 3e-97 91
D781_2730 YP_007345166.1 flagellar biosynthetic protein FliP VFG2494 Protein 1e-74 69
D781_2730 YP_007345166.1 flagellar biosynthetic protein FliP VFG2016 Protein 3e-61 56
D781_2730 YP_007345166.1 flagellar biosynthetic protein FliP VFG1259 Protein 5e-62 56
D781_2730 YP_007345166.1 flagellar biosynthetic protein FliP VFG0827 Protein 2e-31 41
D781_2730 YP_007345166.1 flagellar biosynthetic protein FliP VFG0394 Protein 5e-30 41
D781_2730 YP_007345166.1 flagellar biosynthetic protein FliP VFG0188 Protein 3e-31 41