Gene Information

Name : D781_2018 (D781_2018)
Accession : YP_007344484.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : DNA-binding domain-containing protein, AraC-type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2133915 - 2134301 bp
Length : 387 bp
Strand : -
Note : PFAM: Helix-turn-helix domain

DNA sequence :

ATGACCGAACAACTTCATATAACACTTGTCGTGGAGCTCAGCCGTTGGATAGAAAACCATCTGGGCCGAGCCATTCAGTT
ACCCGAACTCGCCGCCTACTCCGGCTATTCGCTTTGGTATATGCAGAAGGTTTTTAAGGAGATTTCCGGCTATTCGCTGG
GGCGTTACATCCGCGAACGCCGACTGATGGGCGCGCTGCGCAAACTGCGTTTTTCCGAGCAGAGCCTGTTTGATATCGCC
ATTGATTTTGGCTTCGGCTCGCAGTCGCACTTTTGCTATATGTTTAAAAAGCGCTTCGGCTGCACCCCGTCCGAGCTGCG
CAGCACGCCGGCGCTGCCGATCGCGCTGACGCCGCCGCTGCATGAGCAGCTGCCGCAGGCCGCTTAA

Protein sequence :

MTEQLHITLVVELSRWIENHLGRAIQLPELAAYSGYSLWYMQKVFKEISGYSLGRYIRERRLMGALRKLRFSEQSLFDIA
IDFGFGSQSHFCYMFKKRFGCTPSELRSTPALPIALTPPLHEQLPQAA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
soxS	YP_219131.1	DNA-binding transcriptional regulator SoxS	Not tested	SPI-4	Protein	6e-18	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
D781_2018	YP_007344484.1	DNA-binding domain-containing protein, AraC-type	CP000034.1.gene4505.	Protein	9e-19	41
D781_2018	YP_007344484.1	DNA-binding domain-containing protein, AraC-type	BAC0371	Protein	4e-19	41
D781_2018	YP_007344484.1	DNA-binding domain-containing protein, AraC-type	CP001138.1.gene4488.	Protein	2e-18	41
D781_2018	YP_007344484.1	DNA-binding domain-containing protein, AraC-type	NC_002695.1.914293.p	Protein	4e-19	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
D781_2018	YP_007344484.1	DNA-binding domain-containing protein, AraC-type	VFG0585	Protein	2e-18	41