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Name : D781_2006 (D781_2006) Accession : YP_007344474.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Unknown Product : RHS repeat-associated core domain protein Function : - COG functional category : - COG ID : - EC number : - Position : 2106820 - 2111082 bp Length : 4263 bp Strand : + Note : PFAM: RHS protein; PAAR motif; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) DNA sequence : ATGGGTGAAGCAGCGCGCGTCGGGGACAGCATCGGCCATTCCCATGCGCTGGCAGGGATGATTGGCGGCACGCTTATCGG CGGCCTGATTGCCGCCGCCGGTGCGGTGGCGGCGGGCGCCCTGTTTGTCGCCGGGCTGGCGGCCTCCTGCGTGGGCGTCG GCGTGCTGCTGATTGGCGCCAGCCTGGCGGTGGGCTACCTCTCCGGCGAGCTGGCCACCCAGGCGCGCGACGGCATTGCC GCCGCCGGCGCCGGCAGTCTGTCGCCCAAGGGCACGATACTGACCGGCTCCGGCAACGTGTTTATCAACGGCAAACCGGC GGCCATCGCCACCGTCAGCCGCGTGGTCTGCGAGGATGACGGCCCGAGCATGCAGATGGCGCAGGGCTCGGACAAGGTGT TTATCAACGGCTACCCGGCGGTGCGCAGCGGGGACAAGACCAACTGCGACGCGCAGGTGATGGCCGGCTCGCCCGATGTG CGCATCGGCGGCGGCACCGTCACCACGCTGCCCATCAAACCGGAAGTGCCCGACTGGCTGTATAAAATCTCTGACCTGAC GCTGCTGTTCGCCGGCCTGATAGGCGGCGTCGGCGGCGCGGCCAGCAAGCTGGGGGCGCTCGGGCGCATGCTCAGCAAGG CGCCGGGCATCAACAAGCTTGGCCGCGTGGCCTGCCGCGCCGGTGCATTGATGACCGCCACCGCGGCGACGGGCATTATC GCCCGTCCGCTGGACGTGGTCAGCGGCCAGAAATTTCTCGACGGCGACGACGAGCTGGACTTTGTGCTGCCGTCGCGCCT GCCGGTGGCGTGGCAGCGCTACTGGCGCAGCGGCAACCCGGCGGAGGGCGTGCTGGGGCGCGGCTGGAGCCTGTTCTGGG AGAGCAGCCTGCAAATCTGGCAGGAGGGGCTGGTGTGGCGCGCGCCGTCCGGCGATTATGTCTCCTTCCCGATGGTGCCG CGTGGCCACAAGACCTACTGCGAAGCGGAAAAATGCTGGCTGATGCATAACGCCGACGGCAGCTGGCAGGTGTTCGACGT CAGCGAACAGGCGTGGCACTATCCGCGGCTGGAGGCGCAGCAGCCGAGCCGGCTGAGCATGATGACCGACGCCGTCGGCA ACGCCACCTCGCTGTTCTATAACGACGCGGGGCAACTGAGTGAGCTGGTGGACAGCGCCGGGCAGCGTCTGGTCTGCCGC TACCTGACGACGGCCAACGGTGCGTTGCGGCTGGCGGCGGTAGCGTGGCAAAACGGCCAGGATGAGCAGGTGCTGGCGAG TTACGGCTACGACGACGCGGGGCAGCTGGTCACCGTCCGCAACCGCGCCGGCGAGGTGACGCGGCGTTTTGGCTGGCAGG ACGGGCTGATGGTCAGCCATCAGGACCAGAACGGCCTGCTGAACGAATACCGCTGGCAGGAGATTGACGGCCTGCCGCGG GTGGTGGCCTACCGCAACAGCGCCGGCGAGCAGCTGTCCGTCTATTATGATTTCGCCAACGGGACGCGCCGGGCGGTGCG TGACGACGGCAAACAGGCGCTGTGGCAGCTGGATGATGACGACAACGTCGCGCAGTTCACCGACTATGACAGCCGTCGCT ACGGCCTTATCTACGCGCGCGGCGAACTGTGCAGCGTGGTGCTGCCGGGCGGTGCGCAGCGGCAGAGCGAGTGGGACCCG TACGGCCGCATGCTGAGCGAGACCGACCCGCTGGGCCGCACCACCACCTACCAATATTCCCGCAACAGCGGCCGCCTGTT CTCGGTCACCGGGCCTGACGGTAGCCAGGCGTTCCAGCACTGGGACGAGCAGGGGCGTCTGGTCAGACAGACGGACGCGC AGGGGCAGAGCACGCATTACCACTACCCGGACCCGGAAGAGAGCCTGCCGGAGCGCATCACCGACGCGCTGGGCGGTGAA GTGCAGCTGGTGTGGAACGCACAGGGGCAGCTGACGCGCCATACCGACTGTTCCGGCAGCGTCACCGCCTACACCTATGA CGCGCTGGGCCAGCTGACGCACCGCACCGATGCGGAAGGCCACCTGACCCGCTACCGCTGGGACGCCGCCGGCCGGCTGC AGCAGCTGCGCCATCCGGACGGCAGCGACGAGCAGTTTGACTGGAACGCGCAGGGCCAGCTGGCCGCGCACCGGGACCCG CTCGGCAGCGAGACGCGCTGGCAGTACACCCCGCTGGGCCTGCCGGACAGCATCACCGACCGCATCAACCGCACGCGTCG TTATCACTACGGCCCGCGCGGCTGGCTGATGCGGCTGGAGAACGGCAACGGCGCCGACTACCAGTTCAGCTACGACGCGG CAGGCCGCCTGCAGGTGGAACAGCGGCCGGACGGGCAGCGCCGTTACTACCATTACGGCGCCGACGGGCTGCCGACGACG CTGCTGGAAACCGGCGCACCGGTCGCCGATGGCGCGGTGGCAGAGCGGCGGCAGCACTTCCGCTTTGATGAGGCGGGCCA GCTGACGGCGCGCACCACCGACAGCGCCGAATGGCGCTACGACTACGACGCCGGCGGACGGCTGACGACGCTGACGCGCA CGCCGACCGCCGCCGGTGCGGCGCTGGGCATCGAGCCGGACAGTATCCGGCTGCGCTACGACCGCGCCGGCAACCTGCTG AGCGAGCAAGGCGTTAACGGCGAGCTGCAGTATCAGTGGGACGCGCTGGGCAACCTGCAGGCGCTGACGCTGCCGCAGGG CGACCGGCTGCAGTGGCTCTATTACGGTTCCGGCCACGCCAGCGCCATCAGGTTCAATCAGCAGCTGGTGAGCGAGTTCA GCCGCGACCGGCTGCACCGGGAGACCGGACGTACGCAGGGGGCGCTGCACCAGCGGCGGCAGTACGATGCGCTGGGCCGC CGCAGCTGGCAGAGCAGCGGCTTCAGCCACGGGCAACTGACGAAGCCGGAAGACGGCGTGCTGTGTCGGGTGTACCACTA CAGCGGCCGCGGCGAGATAGCCGGCGTCGACGACGCGCTGCGCGGAGAAGTCCGCTACGGCTACGATGCGGAAGGACGCC TGCTGCAGCACCGCGAGGCGCAGCAGGGCAAGCCGGGCCACCGCCTGCAGTACGACATGGCGGACAACCTGCTGGGCGCG CAGAGCGCCAGCCGCGCGCTGGAGGAGCAGCTGCCGCCGGCGCCGCTGGGGGATAACCGGCTGACGCACTGGCAGCAGCT GTTCTACCGTTACGACGGCTGGGGCAACCTGATAAGCCGGCGCAACGGGCTGTACGAGCAGCACTATGTCTACGATGCGG ACAACCGGCTGACGGCAGCGCACGGTCGCGGCCCGCAGGGCGAGTTCCGGGCGCAGTATCACTACGATGCGCTGGGCAGG CGCACGCGCAAGCAGGTGGACTACAAGGGCAAGGCGGCGCAGAGCGCGCGTTTCCTGTGGCAGGGCTACCGGCTGTTGCA GGAGCAGCGGGACGATGGCACGCGCCGCAGCTGGAGCTATGAGCCGGACAGCCCGTGGACGCCGCTGGCGGCCATTGAGC AGGCGGGGGAGAGCCGGCAGGCGGATATCTTCTGGCTGCACAGCGAGCAGAACGGCGCGCCGCTGGAGGTGACGGACGGT GAAGGCGGGCTGCGCTGGTCGGGGGATTACGACACCTTCGGCAGGCTGAAGGGGCAGACGGCGGCGGGCATCATGCAGCG TCGGGGGGCGGCCTATGAGCAGCCGCTGCGCTACGCCGGGCAGTATCAGGATAGCGAGAGCGGACTACACTATAATCTGT TCCGCTACTACGAGCCGGAGGTAGGTCGCTTTACTACCCAGGATCCGATAGGGCTGCAGGGTGGGCTGAACCTGTACCAG TATGCGCCGAACCCGTATGGGTGGGTGGATCCGTTGGGGTTGACTGCTTGTTCTATTAAGGCCGGACGTAATCGCCGAAT GGCGATGAATAAAGCGAAGGATACGGCTGGAATTCCTAGATCACAGCAACATGAAAGTCATTGGCAGATAGGTAATGATC GTAGAAAGCAGGGGTATAGTAATTATATTTATTCTGAAAACCCGGCAGAGCATGGGAAATTTTACCAATATAGAAATGCT GAGGGACATAAAGTTGTAGTGGTAGAACATACGAGCGATCCGAGAAACAAGATTGGTGATGCACATTTCCATGCCGGCAG AGCAAAAACATCACCGCACACTTATGATTTTAAGACCGAAAGGTATGGTAAGGTTCCGGCGGATAGTTCAGGAGACCATC ACATATATTATGATTATGACTAA Protein sequence : MGEAARVGDSIGHSHALAGMIGGTLIGGLIAAAGAVAAGALFVAGLAASCVGVGVLLIGASLAVGYLSGELATQARDGIA AAGAGSLSPKGTILTGSGNVFINGKPAAIATVSRVVCEDDGPSMQMAQGSDKVFINGYPAVRSGDKTNCDAQVMAGSPDV RIGGGTVTTLPIKPEVPDWLYKISDLTLLFAGLIGGVGGAASKLGALGRMLSKAPGINKLGRVACRAGALMTATAATGII ARPLDVVSGQKFLDGDDELDFVLPSRLPVAWQRYWRSGNPAEGVLGRGWSLFWESSLQIWQEGLVWRAPSGDYVSFPMVP RGHKTYCEAEKCWLMHNADGSWQVFDVSEQAWHYPRLEAQQPSRLSMMTDAVGNATSLFYNDAGQLSELVDSAGQRLVCR YLTTANGALRLAAVAWQNGQDEQVLASYGYDDAGQLVTVRNRAGEVTRRFGWQDGLMVSHQDQNGLLNEYRWQEIDGLPR VVAYRNSAGEQLSVYYDFANGTRRAVRDDGKQALWQLDDDDNVAQFTDYDSRRYGLIYARGELCSVVLPGGAQRQSEWDP YGRMLSETDPLGRTTTYQYSRNSGRLFSVTGPDGSQAFQHWDEQGRLVRQTDAQGQSTHYHYPDPEESLPERITDALGGE VQLVWNAQGQLTRHTDCSGSVTAYTYDALGQLTHRTDAEGHLTRYRWDAAGRLQQLRHPDGSDEQFDWNAQGQLAAHRDP LGSETRWQYTPLGLPDSITDRINRTRRYHYGPRGWLMRLENGNGADYQFSYDAAGRLQVEQRPDGQRRYYHYGADGLPTT LLETGAPVADGAVAERRQHFRFDEAGQLTARTTDSAEWRYDYDAGGRLTTLTRTPTAAGAALGIEPDSIRLRYDRAGNLL SEQGVNGELQYQWDALGNLQALTLPQGDRLQWLYYGSGHASAIRFNQQLVSEFSRDRLHRETGRTQGALHQRRQYDALGR RSWQSSGFSHGQLTKPEDGVLCRVYHYSGRGEIAGVDDALRGEVRYGYDAEGRLLQHREAQQGKPGHRLQYDMADNLLGA QSASRALEEQLPPAPLGDNRLTHWQQLFYRYDGWGNLISRRNGLYEQHYVYDADNRLTAAHGRGPQGEFRAQYHYDALGR RTRKQVDYKGKAAQSARFLWQGYRLLQEQRDDGTRRSWSYEPDSPWTPLAAIEQAGESRQADIFWLHSEQNGAPLEVTDG EGGLRWSGDYDTFGRLKGQTAAGIMQRRGAAYEQPLRYAGQYQDSESGLHYNLFRYYEPEVGRFTTQDPIGLQGGLNLYQ YAPNPYGWVDPLGLTACSIKAGRNRRMAMNKAKDTAGIPRSQQHESHWQIGNDRRKQGYSNYIYSENPAEHGKFYQYRNA EGHKVVVVEHTSDPRNKIGDAHFHAGRAKTSPHTYDFKTERYGKVPADSSGDHHIYYDYD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3692 | YP_001402646.1 | RHS/YD repeat-containing protein | Not tested | YAPI | Protein | 0.0 | 48 |
| api89 | CAF28563.1 | putative membrane-bound sugar-binding protein | Not tested | YAPI | Protein | 0.0 | 48 |
