Gene Information

Name : D781_1959 (D781_1959)
Accession : YP_007344430.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : ABC-type metal ion transport system, periplasmic component/surface adhesin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2060962 - 2061900 bp
Length : 939 bp
Strand : -
Note : PFAM: Periplasmic solute binding protein family

DNA sequence : 
ATGCCGCTGAAACACCACGTGTTACCGCCGTTGCGCCGGTTAGTCCGCGCCGCCCGTCCGCTTACCCTGTGCGCCCTGCT
GTGCGCCGGCGCCCTGCTCAGCCCCACCGCCTTGGCGGAAAAGAAGCTGCACGTGGTGACCACCTTCACCATTATTCAGG
ATATTGCGCAAAATGTGGCGGGCGACGCCGCGGTGGTGGAATCCATCACCAAGCCCGGCGCGGAAATCCACGATTACCAG
CCCACCCCGCGCGATATCGTCAAGGCGCAGCACGCCGATTTGATCCTGTGGAACGGCATGAATCTGGAACGCTGGTTCCA
GCGCTTCTTTGAAAATATCAAACAGGTGCCCGCCGCCGTCGTCACCGAAGGCATTACCCCGCTGCCGATCCGCGAAGGGC
CTTACAACGGCAACCCTAACCCGCACGCCTGGATGTCGCCCACCAACGCGCTGGTCTACATCGAAAATATCCGCCAGGCG
CTGGTCAAACACGATCCGGCCAATGCGCAGGTCTACAACCGCAACGCCAAGGCCTACAGCGCAAAGATCGCCGCGCTCGA
CGCGCCGCTGCGTGAGCGCCTGGCGCGTATTCCCGCCGCGCAGCGCTGGCTGGTCACCAGCGAAGGCGCCTTCAGCTATC
TGGCGAAGGATTATCAGTTGAAAGAGATCTATCTGTGGCCGATCAACGCCGATGAACAGGGCACGCCGCAGCAGGTGCGC
CGGGTGATTGACGCGGTGCGCAGCCACCATATCCCGGTCGTGTTCAGCGAAAGCACCATTTCCGATAAGCCGGCCAAACA
GGTCGCCAAAGAGACCGGCGCACAGTACGGCGGCGTGCTGTATGTCGATTCGCTCTCCGCCGCCGGCGGGCCGGTGCCGA
CCTACATCGATCTGCTGAATGTCACCGTGCAGACCATCGCCAAAGGATTTAAACAATGA

Protein sequence : 
MPLKHHVLPPLRRLVRAARPLTLCALLCAGALLSPTALAEKKLHVVTTFTIIQDIAQNVAGDAAVVESITKPGAEIHDYQ
PTPRDIVKAQHADLILWNGMNLERWFQRFFENIKQVPAAVVTEGITPLPIREGPYNGNPNPHAWMSPTNALVYIENIRQA
LVKHDPANAQVYNRNAKAYSAKIAALDAPLRERLARIPAAQRWLVTSEGAFSYLAKDYQLKEIYLWPINADEQGTPQQVR
RVIDAVRSHHIPVVFSESTISDKPAKQVAKETGAQYGGVLYVDSLSAAGGPVPTYIDLLNVTVQTIAKGFKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 7e-94 68
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 7e-94 68
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 5e-94 68
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-94 68
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 7e-94 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_1959 YP_007344430.1 ABC-type metal ion transport system, periplasmic component/surface adhesin BAC0439 Protein 5e-111 82
D781_1959 YP_007344430.1 ABC-type metal ion transport system, periplasmic component/surface adhesin BAC0349 Protein 3e-94 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_1959 YP_007344430.1 ABC-type metal ion transport system, periplasmic component/surface adhesin VFG0525 Protein 3e-94 68