|
Name : D781_1873 (D781_1873) Accession : YP_007344345.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Unknown Product : nucleotidyltransferase/DNA polymerase involved in DNA repair Function : - COG functional category : - COG ID : - EC number : - Position : 1974884 - 1976152 bp Length : 1269 bp Strand : + Note : PFAM: Domain of unknown function (DUF4113); impB/mucB/samB family C-terminal; impB/mucB/samB family DNA sequence : ATGTACGCGCTTGCGGATGTGAACAGCTTTTACGCGAGCTGCGAAACGCTGTGGCGCCCGGACCTGCGCGGCCGTCCGGT CGTCGTGCTCTCAAATAATGACGGCTGCGTGGTGGCCAGAAACGAAGAGGCAAAGGCTCTCGGCATTAAAATGGGAGTGC CTTACTTCAAGGTTAAGCACCCTTTTGAGCGTGCTGGCGGCATCGCCTTCAGCAGCAATTATGAGCTGTACGCTGATATG TCGATGCGCGTGATGTCTGTACTGGAAGAGATGGCGCCGCGCGTTGAGATTTACTCAATTGATGAGAGCTTTATAGATCT GACCGGCGTGCGTTGCTGCGTTGAACTGGAAAACTTCGGCCGCCAGGTGAGGGCGAGAGTGCTGCGCGATACCGGCCTGA CGGTGGGTATCGGCATTGCCCCAACCAAGACGCTGGCAAAACTGGCCAACCATGCGGCGAAAAAGTGGCCGGGGACCGGG GGCGTGGTGGATCTGTCCAGTGCCGGACGCCAACGCAAACTGATGGGGCTGGTGCCTGTCGCAGAGGTGTGGGGCATCGG CCGGCGGCTAGCGAAAAAGCTGCAGATCATGGGGATCGACACGGCGCTGCAGTTAGCCGATACCAGCACGGCAATGATAC GAAAGCATTTTAGCGTGGTGATAGAAAAAACGGTGCGTGAGCTGCGCGGTGAACCGTGCCTGGAACTTGAAGAATTTGCG CCAACGAAGCAGCAGATCCTCTGCTCGCGTTCGTTTGGCGAGCGCATCACCGAATATGACGATATGCGCCAGGCTATCTG CATGTACGCGACGCGGGCGGCAGAAAAACTCCGTAAGGAGCATCAGTACTGCATGCACATCAGCGCCTGGCTCAAAACCA GCCCGTTCGCTATCAATGAGCAATACTACGGTAATTCGGCAAGTATAAAACTGAGCACGCCAACGCAAGATAGCCGCGAC ATTATCGCAGCGGCCGTGCGCTGCTTTGACGCTATTTGGCAGCCCGGGCATCGCTATCAAAAAGCGGGCGTTATGTTGCA GGACTTCTTCAGCCACGGCGTTGCACAGCTCGGATTGTTCGATGAGTACCAGCCGAGGCATAACAGTGAGCAACTGATGA GCGTTCTGGACCGGATCAATAATTCCGGAAGAGCCACGTTATGGTTCGCCGGTCAGGGCACGCAACAAGCGTGGTCGATG AAGCGCGAAATGCTGTCGCCGGCGTACACGACGCGCGTGAGCGATTTGCCACGGGCAAGAGTGTGCTAG Protein sequence : MYALADVNSFYASCETLWRPDLRGRPVVVLSNNDGCVVARNEEAKALGIKMGVPYFKVKHPFERAGGIAFSSNYELYADM SMRVMSVLEEMAPRVEIYSIDESFIDLTGVRCCVELENFGRQVRARVLRDTGLTVGIGIAPTKTLAKLANHAAKKWPGTG GVVDLSSAGRQRKLMGLVPVAEVWGIGRRLAKKLQIMGIDTALQLADTSTAMIRKHFSVVIEKTVRELRGEPCLELEEFA PTKQQILCSRSFGERITEYDDMRQAICMYATRAAEKLRKEHQYCMHISAWLKTSPFAINEQYYGNSASIKLSTPTQDSRD IIAAAVRCFDAIWQPGHRYQKAGVMLQDFFSHGVAQLGLFDEYQPRHNSEQLMSVLDRINNSGRATLWFAGQGTQQAWSM KREMLSPAYTTRVSDLPRARVC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-131 | 64 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-131 | 64 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-74 | 49 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 8e-88 | 48 |
