Gene Information

Name : D781_1443 (D781_1443)
Accession : YP_007343935.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Resistance
Product : transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1502775 - 1503230 bp
Length : 456 bp
Strand : -
Note : PFAM: Helix-turn-helix domain

DNA sequence : 
ATGGATCGCGCCAATATCATTCACGACTTACTGAACTGGATTGAAACTCACCTGGACCAACCGCTGCTGCTGGATAACGT
GGCGGCAAAATCGGGCTACTCCAAATGGCACCTGCAACGCATGTTCCGCAGCACCACCGGCCACGCCCTCGGCAGCTATA
TCCGCGAACGCCGGCTGTCGAAAGCCGCGCAGGCGCTGAGATCGACGCCCCGCCCGATCCTGGATATCGCCCTGCAATAT
CATTTTGATTCCCAACCGTCGTTCTCCCGCGCGTTCAAAAAGCAGTTCGGCAAAACGCCGGCGGTTTACCGCCGCAGCGA
CTGGGATGCCTTCGACGATGCACCGCTGCCCGCCTCCGCGCAGCCGGCGCAGTACCAGGAGTCGCCGGGGCTGCAGCTGC
TGTACGCCAAACAGTGCGTCGACGGCAAGTGCAGCAACTGGGTGGGTCAGCGCTAG

Protein sequence : 
MDRANIIHDLLNWIETHLDQPLLLDNVAAKSGYSKWHLQRMFRSTTGHALGSYIRERRLSKAAQALRSTPRPILDIALQY
HFDSQPSFSRAFKKQFGKTPAVYRRSDWDAFDDAPLPASAQPAQYQESPGLQLLYAKQCVDGKCSNWVGQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 3e-28 57
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 3e-28 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_1443 YP_007343935.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain NC_010558.1.6276025. Protein 2e-28 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_1443 YP_007343935.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain VFG1038 Protein 1e-28 57