Gene Information

Name : D782_0823 (D782_0823)
Accession : YP_007339054.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 837972 - 839489 bp
Length : 1518 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGTCTGAACAACACGCACAAGGTGCTGACGCGGTAGCTGACCTTAACAATGAACTGAAAGCGCGCCGCGAGAAGCTGGC
AGCACTGCGCGAGCAGGGCCTCCCGTTCCCGAACGATTTCCGTCGCGATCACACCTCAGACCAACTGCACGCTGACTTCG
ACGCCAAAGAGAACGAAGAGCTGGAAGCGCTGAACATCGAAGTGTCCGTTGCTGGCCGCATGATGACCCGCCGTATCATG
GGTAAAGCCTCTTTCGTGACCTTGCAGGACGTGGGCGGCCGCATTCAGCTGTACGTTGCCCGTGACGATCTGCCGGAAGG
TGTTTACAACGAGCAGTTCAAGAAATGGGACCTCGGCGATATCCTCGGCGCGAAAGGTAAACTGTTCAAAACCAAAACCG
GTGAACTCTCTATCCACTGCACCGAGCTGCGTCTGCTGACCAAAGCTTTGCGCCCACTGCCGGACAAATTCCACGGCCTG
CAGGATCAGGAAGCGCGCTATCGCCAGCGTTACCTGGATCTCATCTCTAACGATGAATCCCGTAATACCTTCAAAATTCG
CTCGAAGATCCTGGCTGGCATCCGTCAGTTCATGGTTGGCCGCGACTTTATGGAAGTGGAAACCCCGATGATGCAGGTGA
TCCCAGGCGGTGCGTCTGCCCGTCCGTTCATCACCCACCACAACGCCCTGGACCTGGACATGTACCTGCGTATCGCGCCG
GAACTGTACCTGAAACGTCTGGTGGTTGGCGGCTTCGAGCGCGTCTTCGAAATCAACCGTAACTTCCGTAACGAAGGCAT
CTCCGTACGTCATAACCCAGAGTTCACCATGATGGAACTCTATATGGCGTATGCGGATTATAAAGATCTGATCGAACTGA
CCGAATCACTGTTCCGCACTCTGGCACAGGATATTCTCGGTACTACCAAAGTGCCTTACGGCGAAGAAACCTTCGACTTC
GGCAAACCGTTCGAAAAACTGACTATGCGCGAAGCGATCAAGAAATACCGTCCGGAAACGGATATGGCGGATCTGGATAA
CTTCGATTCTGCAAAAGCGATTGCGGAAAGCATCGGTATTAAAGTTGAGAAGAGCTGGGGTCTGGGCCGCATCGTGACCG
AAATCTTCGAAGAAGTGGCCGAAGCGCACCTGATTCAGCCGACCTTCATCACGGAATACCCGGCTGAAGTCTCTCCGCTG
GCGCGTCGTAATGATGTGAACCCGGAAATTACTGACCGCTTTGAATTCTTCATCGGTGGCCGTGAAATCGGTAACGGCTT
TAGCGAGCTGAACGATGCAGAAGACCAGGCGCAGCGTTTCCAGGATCAGGTTGATGCGAAAGCCGCAGGCGACGACGAAG
CGATGTTCTTCGACGAAGACTACGTAACCGCGCTGGAACACGGCCTGCCGCCGACTGCGGGTCTGGGTATCGGTATCGAC
CGTATGGTGATGCTGTTCACCAACAGCCACACCATCCGCGACGTGATTCTGTTCCCGGCGATGCGTCCGGTGAAATAA

Protein sequence :
MSEQHAQGADAVADLNNELKARREKLAALREQGLPFPNDFRRDHTSDQLHADFDAKENEELEALNIEVSVAGRMMTRRIM
GKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
QDQEARYRQRYLDLISNDESRNTFKIRSKILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTTKVPYGEETFDF
GKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPL
ARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-170 69
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 1e-94 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_0823 YP_007339054.1 lysyl-tRNA synthetase (class II) VFG1668 Protein 7e-171 69