Gene Information

Name : D782_3983 (D782_3983)
Accession : YP_007342065.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : P pilus assembly protein, chaperone PapD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4161481 - 4162221 bp
Length : 741 bp
Strand : +
Note : PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain

DNA sequence : 
ATGAGCATGAAAAGAAATAATGGCCGCTGGATAGCAGGCATGATGCTGGGTGTTCTCAGCAGCTACGCGCAGGCTGGCGT
CTCACTTGATCGCACACGCGTCATCATTACCGAAAAAGACGCTTCAGCGAGCGCGAATTTATCCAATACCAGCCCGGATA
TTCCTTTTCTGGCGCAGTCATGGGTAGAAGATGAAAAAGGCAACCGGATCACCTCACCACTGGTTGTGCTTCCCCCTTTG
CAGCGTATCAATGGCGGACAAAAAGGGATTGCCCGCGTTACCAAAACCGATGGGGTAGAAAAACTGCCGCAGGACAGAGA
GAGCCTTTTTTATCTCAACGTTCGGGAAATTCCGCCTAAACCGGATAAACCTAACGTGCTGCAACTGGCCATGCAATCGC
GCATCAAGCTGTTTTATCGACCAGCGGCAATCATCCCCAAAAGCAAGAGTGAAATCTGGCAAGACCAGGTGACGTTCCAG
AAAAACGGCACACAGATGACGGCACAGAACCCGACGCCGTATTACGTCACCGTCATCGGGCTTTCTAAAGCGGGTCAGAA
AATTACCCGTTTCCCGGGAATTATGATCGCACCGAAATCAAGCCAGCAATTTGCCATTACGGATGCGGGTGTCGGTGAGT
TTTCAATGATGTACGTGAATGACTACGGCGGCCATCCCGAGCTGAAATACCGTTGCGATGGCAGTACCTGTAAAGCGTTA
CCCGCAGCTCAACAGGATTAA

Protein sequence : 
MSMKRNNGRWIAGMMLGVLSSYAQAGVSLDRTRVIITEKDASASANLSNTSPDIPFLAQSWVEDEKGNRITSPLVVLPPL
QRINGGQKGIARVTKTDGVEKLPQDRESLFYLNVREIPPKPDKPNVLQLAMQSRIKLFYRPAAIIPKSKSEIWQDQVTFQ
KNGTQMTAQNPTPYYVTVIGLSKAGQKITRFPGIMIAPKSSQQFAITDAGVGEFSMMYVNDYGGHPELKYRCDGSTCKAL
PAAQQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 6e-51 48
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 2e-44 46
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-49 46
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 3e-49 46
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-49 46
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 4e-49 45
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 4e-49 45
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 3e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3983 YP_007342065.1 P pilus assembly protein, chaperone PapD VFG0885 Protein 8e-45 46
D782_3983 YP_007342065.1 P pilus assembly protein, chaperone PapD VFG1547 Protein 8e-50 46
D782_3983 YP_007342065.1 P pilus assembly protein, chaperone PapD VFG0896 Protein 2e-49 45