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Name : D782_3982 (D782_3982) Accession : YP_007342064.1 Strain : Enterobacteriaceae bacterium FGI 57 Genome accession: NC_020063 Putative virulence/resistance : Virulence Product : P pilus assembly protein, porin PapC Function : - COG functional category : - COG ID : - EC number : - Position : 4158958 - 4161438 bp Length : 2481 bp Strand : + Note : PFAM: Type VII secretion system (T7SS), usher protein; PapC C-terminal domain; PapC N-terminal domain DNA sequence : ATGTCGGTAAAATTAAAAACAAGAATATCGATAATTGCTATCAAGGTGATTATGTTCTGCTATTGCTCCAGCGGATATGC AGACGACAGCGTTGAATTTAATACCGACGTCCTGGATGCGGCCGATCGTACGCATGTTGATCTCACGCGCTTCTCGACAG ACAACTACGTGACGCCTGGAACCTACCTGCTCGATATTCGCATAAACAGCCAACCGGTCGGGCAAGAAAAGATCCAGTAC GTTGCCGTATCTGAAGGCAAGAGCAGTCAGCCCTGCATCAGTGGCGATCTGCTGGCCAAACTCGCTCTAAAAGAGGATGC GCTGCTGCAGGTTAAGCAGGTCTATGAGAATTGCTATTCACTGCAAAGTCTGGCTGGCGCCAAATTAACTAACTATGCCG GGGTACTGGATATCACCGTTCCACAGGCATGGATGAAATATAACGATCCAAACTGGACTCCGCCAGAGCGCTGGGACCAG GGCATTGCCGGCGCAATTTTCGACTACAGTCTGAGCGGACAACTGACTCGCCAGTTTGATGGTAGTGAAAACTACAACTC GGTATCGGGTTATGGTCAGGCCGGCGTCAACGTTGGGGCCTGGCGCGTTCGGGGCGAATATCAGACCAACTACTCAAGTA GTAATCACCAGTTTGATTTCGACTGGAACCAGTTTTACGCCTATCGCCCGCTACCAACCATGGCCGCGAAGCTTACCGTC GGCGAAATCTACCTGAACTCTCAGGTTTTCGACACGCTGCGCTTTACCGGTGCCAACCTTGCGAGCGACGAGCGCATGCT GCCGCCAGCATTACAGGGTTATGCACCTGAAATTCACGGAATAGCCAAAAGCAGTGCCCGGGTGACCGTTAGCCAAAGCG GCCGCGTAATTTATGAAACGACCGTTCCGGCTGGCCCATTTAATATTCAGGATCTTCGTAGTTCCGTGCGCGGGACACTG GACGTGCGTGTTGAAGAGCAGGATGGCTCCGTCTCGTCATTTCAGGTTAATACGGCCAACATCCCGTATCTGACCCGCCC AGGCTACGTACGCTACAACATCTCTGGCGGGACGCCATCGCGCTATAACCATAAGTTTCAGGGGCCGTCTTTTGTCTCAG GTGATTTTTCCTGGGGGATAAGTAATGCATGGTCGCTGTATGGCGGCTTACAAACATCCGGCGAAGAGTACACCGCCTCC TCCGTGGGTATTGGCCGTGACCTGAGCATACTGGGCGCCATTTCCGTCGATGCGACAGAATCCTGGAGCCGTCAGCGTGA TGGACAGCGCTTAAAAGGCACGTCATGGAAGCTGAGCTACGCCAAAACATTTGATGAATACAACAGTGCCATCACCTTTG CGGGCTATCGCTTCTCTGAAGAAAACTTCCGCTCAATGGCCCAATACCTGGACGACCGCTATCAGGGTTTTGACAATCTG GGACGAGAGAAAGAGATCTATACCATCACCGGTAATAAAACATTCTGGGCAGGAGAAGCCGGAAAATCGACCACGCTGTT TCTGACCTATACCCACCAAAATTATTGGGATAAGCGAAGCCAGGATCGTTACGGCGTATCCGTTGGCCGTTCTTTCCGTA TCGGCGAGATAAGCGGTATCAGCGCCAACCTCTCCGCCTATCGTACGGATTACCAGGGCCGCCGTGATGATTCCATCGCA TTCTCGCTATCGGTACCGATTGGCGACAACAAATGGGCGGGTCTGGATATTCAAAGCAATAACGGCAAAACCAGCCCCAT GGCGTCCTACACCGATAACAGCGATTACAACAATTTGTGGCGCATTCGTGCCGGTGCCAGCCAAAGCGGATATGCCAACG TTGATGGCTACTACCAGCATCGTTCACAACTTGCAGAAATCAATACGAATGCCAGCTATCAGCAAGGCCATTACATGGCG CTTAGCAGCACGTTGCGCGGTGGATTTACGGCCACACGTCACGGCGCAGCCATGCATAACAGCGGCGCAACGCTTAATAC GGCCCGCATGATGGTCGACACCAATGGTATCGCTGGCGTCCCGCTCAACGGCCAAAAAGCGCGTACCAATCTCTTTGGTA TCGCCGTGGTACCGGACGTCGTGAGCTACAACAGCTTTGACACGCGTGTGGACGTCGATGCGATGGATAGCGATATCGAA CCCTCAAAAGCCATCAGCACGACCACGCTTACGGAAGGTGCAATTGGTTATCAGGCCTTTGGTATGGCGAAGGGGATGAA AATGATGGGGAATATTCGACTGGCCGATAACAGCACTCCGCCATTTGGCGCAGAAGTCTATAACGCAGATGGCGTCAGCG TTGCGATGGTGCTTGAAGATGGAAAAGCCTGGCTGGCGGGCGTTAACCCGGATGAAACACTGCGTGTGAATTGGGGCGGT ATGGATCAGTGCAAGGTCAGCATACCGGCATTGTCCGGCAGCAACAGCACGCTATCAGGCGCACTGCTGCCGTGCCGCTA A Protein sequence : MSVKLKTRISIIAIKVIMFCYCSSGYADDSVEFNTDVLDAADRTHVDLTRFSTDNYVTPGTYLLDIRINSQPVGQEKIQY VAVSEGKSSQPCISGDLLAKLALKEDALLQVKQVYENCYSLQSLAGAKLTNYAGVLDITVPQAWMKYNDPNWTPPERWDQ GIAGAIFDYSLSGQLTRQFDGSENYNSVSGYGQAGVNVGAWRVRGEYQTNYSSSNHQFDFDWNQFYAYRPLPTMAAKLTV GEIYLNSQVFDTLRFTGANLASDERMLPPALQGYAPEIHGIAKSSARVTVSQSGRVIYETTVPAGPFNIQDLRSSVRGTL DVRVEEQDGSVSSFQVNTANIPYLTRPGYVRYNISGGTPSRYNHKFQGPSFVSGDFSWGISNAWSLYGGLQTSGEEYTAS SVGIGRDLSILGAISVDATESWSRQRDGQRLKGTSWKLSYAKTFDEYNSAITFAGYRFSEENFRSMAQYLDDRYQGFDNL GREKEIYTITGNKTFWAGEAGKSTTLFLTYTHQNYWDKRSQDRYGVSVGRSFRIGEISGISANLSAYRTDYQGRRDDSIA FSLSVPIGDNKWAGLDIQSNNGKTSPMASYTDNSDYNNLWRIRAGASQSGYANVDGYYQHRSQLAEINTNASYQQGHYMA LSSTLRGGFTATRHGAAMHNSGATLNTARMMVDTNGIAGVPLNGQKARTNLFGIAVVPDVVSYNSFDTRVDVDAMDSDIE PSKAISTTTLTEGAIGYQAFGMAKGMKMMGNIRLADNSTPPFGAEVYNADGVSVAMVLEDGKAWLAGVNPDETLRVNWGG MDQCKVSIPALSGSNSTLSGALLPCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 1e-149 | 44 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 4e-151 | 43 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 9e-151 | 43 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 3e-150 | 43 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 4e-150 | 43 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 6e-151 | 43 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 4e-151 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D782_3982 | YP_007342064.1 | P pilus assembly protein, porin PapC | VFG0884 | Protein | 4e-151 | 43 |
| D782_3982 | YP_007342064.1 | P pilus assembly protein, porin PapC | VFG1548 | Protein | 2e-151 | 43 |
| D782_3982 | YP_007342064.1 | P pilus assembly protein, porin PapC | VFG0895 | Protein | 3e-151 | 43 |
