Gene Information

Name : D782_3867 (D782_3867)
Accession : YP_007341959.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4040080 - 4040769 bp
Length : 690 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGCAACAACCGCTGATCTGGCTGGTGGAAGATGAGATAAGCATCGCGGATACGCTTATCTATATGCTTCAACAAGAGGG
ATTTACCGTCAGGGCGTTTGAGCGCGGCCTGCCCGCGCTGGAAGAGGCACGGCATCGCTTGCCAGATCTGGCTATTCTTG
ACGTCGGCCTGCCGGATATCAGCGGTTTCGAATTGTGCCGCCAGCTGCTGGCACACCACCCGGCGTTGCCGGTGCTGTTT
CTCACCGCGCGCAGCGACGAAGTGGACAAACTGCTGGGGCTGGAAATCGGCGCGGATGACTACGTCGCCAAGCCGTTTTC
GCCGCGTGAAGTCTGCGCCCGCGTGCGTACGATCCTGCGTCGTCTGCAAAAGTTTTCTGCACCGCCTGCGCAGGTGCGCG
TGGGTGATTTTCTTCTCGATGAACCCGCCGCGCAGGTGAGCTGGTGCGGCCAGCCGCTGTTGCTGACGCGCTACGAATTT
CTGCTGCTGAAAACGCTGCTGCTGTCGCCGGGGCGGGTCTATTCGCGTCAGCAACTGATGGATATCGTCTGGGGCGATGC
GGCGGAAAGCTTCGATCGCACCGTGGATACGCATATCAAAACCCTGCGCGCCAAGCTGCGTGCGATCGACCCGTCGCGGC
AGCCTATCAATACCCATCGTGGCCTCGGCTATAGTCTGGTGAAAGCCTGA

Protein sequence :
MQQPLIWLVEDEISIADTLIYMLQQEGFTVRAFERGLPALEEARHRLPDLAILDVGLPDISGFELCRQLLAHHPALPVLF
LTARSDEVDKLLGLEIGADDYVAKPFSPREVCARVRTILRRLQKFSAPPAQVRVGDFLLDEPAAQVSWCGQPLLLTRYEF
LLLKTLLLSPGRVYSRQQLMDIVWGDAAESFDRTVDTHIKTLRAKLRAIDPSRQPINTHRGLGYSLVKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 2e-37 44
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 2e-33 44
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 2e-37 44
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 2e-33 43
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 4e-34 43
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 3e-34 43
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 4e-34 43
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1676. Protein 1e-30 42
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 3e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 1e-30 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 6e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 6e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 6e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 5e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 6e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 3e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 6e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 6e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 6e-33 41
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 8e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3867 YP_007341959.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 3e-18 41