Gene Information

Name : D782_3685 (D782_3685)
Accession : YP_007341780.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : arginine/lysine/ornithine decarboxylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3821994 - 3824147 bp
Length : 2154 bp
Strand : -
Note : PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal domain

DNA sequence :
ATGAATATAATCGCCATTATGGGGCCGCACGGCGTCTACTACAAAGACGAGCCCATCAAGGAGCTGGAAAGCGCGTTACT
CGCGCAGGGCTTCAAAATTATCTGGCCGCAAAACAGCGCTGACCTGCTGAAATTTATCGAACATAACCCACGCATCTGCG
GCGTTATCTTCGACTGGGACGAATACAACGTTGACCTGTGCAGCGAGATCAATCAGCTAAACGAATATCTCCCGCTCTAC
GCCTTCATCAACACCCATTCGACGATGGATGTCAGCGTCCACGATCTACGGATGGCGCTGTGGTTCTTTGAATATGCGCT
GGGGCAGTCTGGCGATATCGCCACCCGCATCCGCCAGTACACCGATGAGTACCTGGATAATATTACGCCGCCGTTCACCA
AAGCGCTGTTTACCTATGTGAATGAGGGGAAATACACCTTCTGTACGCCCGGTCATATGGCGGGAACGGCGTATCAAAAG
AGCCCGATAGGTTGCCTGTTCTATGATTTCTTTGGCGCTAATACGCTGAAGGCGGATGTCTCGATTTCCGTCACCGAGCT
GGGTTCGCTGCTCGACCACACTGGCCCGCATCTGGAGGCGGAAGAGTATATTGCCCGCACCTTTGGCGCTGAACAGAGTT
ATATGGTGACCAACGGGACCTCGACGTCGAACAAAATTGTCGGCATGTACGCCGCACCGGCGGGCAGCACGTTGTTGATT
GACCGTAACTGCCATAAATCACTCGCCCATTTGCTGATGATGAGTGATGTGGTGCCATTGTGGCTGAAGCCAACCCGGAA
CGCGCTCGGTATTCTCGGAGGGATCCCGCGGCATGAATTTACCCGCGACAGCCTGCAACAGAAAGTTGATGCGACTAAAA
ACGCACAGTGGCCGGTGCATGCGGTGATCACGAATTCCACCTACGATGGCCTGCTGTATAACACCAACTGGATCAAGCAA
ACGCTGGATGTGCCCTCGATTCACTTCGACTCGGCGTGGGTGCCGTATACCCACTTCCACCCAATTTATCAGGGCAAAAG
CGGTATGAGCGGCGAGCGCGTGCCAGGGAAAGTGTTCTTCGAAACGCAGTCGACGCATAAAATGCTGGCCGCGCTGTCGC
AGGCTTCGCTTATTCACATCAAGGGCGACTATGATGAAGATACCTTCAACGAAGCCTTTATGATGCACACCTCGACATCG
CCGAGTTACCCGATTGTCGCTTCAATCGAAACGGCAGCGGCGATGCTGCGCGGCAATCCTGGGAAGCGCCTGATCACCCG
CTCGGTGGAGCGTGCATTGCATTTCCGCAAAGAGGTTCAGCGACTGCGTGAAGAGTCGGATAGCTGGTTCTTTGACATCT
GGCAGCCCGAAGAGATCGACGAAGCAGAATGCTGGCCGGTCTCGCCGGGGGACGACTGGCATGGATTTGCCGATGCCGAC
AGCGATCATATGTTCCTCGATCCGGTCAAAGTGACCATCCTGACGCCGGGTATGGATGAGCAGGGCAACATGAGCGACGA
GGGGATCCCGGCGGCGCTGGTGGCGAAATATCTCGATGAGCACGGCGTGGTGGTGGAGAAAACCGGGCCCTATAATCTGC
TGTTCCTGTTTAGCATCGGTATCGATAAAACCCGAGCAATGGGCCTGCTGCGCGGGTTAACGGAGTTCAAACGCGCCTAC
GATCTTAATCTGCGGGTGAAAAACATGCTGCCGGATCTCTACGCGGAAGATCCGGATTTCTACCGCAATATGCGAATTCA
GGATCTGGCACAGGGGATCCACAAACTGATCCGCCAGCACGATCTGCCGCGTTTAATGCTGCGTGCGTTTGACGTGCTGC
CGGAAATGAAGATGACGCCGCATCAGGCATGGCAGCGTCAGATTAAAGGTGACGTGGAAACGGTAGCGCTGGAAGAAGTC
GTGGGGCGCGTTTCCGCTAATATGATCCTGCCGTATCCGCCGGGCGTGCCGCTGTTGATGCCGGGCGAGATGATCACCGA
AGAGAGCCGCTCGGTGCTCGATTTCCTGCTGATGCTGTGCTCGGTCGGGCGTCACTATCCGGGCTTCGAGACGGATATCC
ACGGTGCGAAGCGTGATGAGAACGGCGTTTACCGGGTTCGAGTCTTAAAAAGCGGCGAAGGGGTTGCGCGTTAA

Protein sequence :
MNIIAIMGPHGVYYKDEPIKELESALLAQGFKIIWPQNSADLLKFIEHNPRICGVIFDWDEYNVDLCSEINQLNEYLPLY
AFINTHSTMDVSVHDLRMALWFFEYALGQSGDIATRIRQYTDEYLDNITPPFTKALFTYVNEGKYTFCTPGHMAGTAYQK
SPIGCLFYDFFGANTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPRHEFTRDSLQQKVDATKNAQWPVHAVITNSTYDGLLYNTNWIKQ
TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVFFETQSTHKMLAALSQASLIHIKGDYDEDTFNEAFMMHTSTS
PSYPIVASIETAAAMLRGNPGKRLITRSVERALHFRKEVQRLREESDSWFFDIWQPEEIDEAECWPVSPGDDWHGFADAD
SDHMFLDPVKVTILTPGMDEQGNMSDEGIPAALVAKYLDEHGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLTEFKRAY
DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQHDLPRLMLRAFDVLPEMKMTPHQAWQRQIKGDVETVALEEV
VGRVSANMILPYPPGVPLLMPGEMITEESRSVLDFLLMLCSVGRHYPGFETDIHGAKRDENGVYRVRVLKSGEGVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 71
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3685 YP_007341780.1 arginine/lysine/ornithine decarboxylase VFG1670 Protein 0.0 61