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Name : D782_3646 (D782_3646) Accession : YP_007341750.1 Strain : Enterobacteriaceae bacterium FGI 57 Genome accession: NC_020063 Putative virulence/resistance : Unknown Product : type VI secretion protein IcmF Function : - COG functional category : - COG ID : - EC number : - Position : 3787730 - 3791251 bp Length : 3522 bp Strand : + Note : PFAM: Protein of unknown function (DUF1215); ImcF-related N-terminal domain; Intracellular multiplication and human macrophage-killing; TIGRFAM: type VI secretion protein IcmF DNA sequence : GTGTTCAGATTAACGACACCCCGTATTTTTTCCAGTCTGAGGACCATGCTCAGACCGGCGATGCCCCGGTTTAAGGTTTC TGCCTTCTGGCTGCTGATACTGGCATGGATTTTTCTGCTGGTATGGATCTGGTGGAAAGGCCCGACCTGGACATTGTACG GAGAGCACTGGCTCAAGCCACTGACAAACCGCTGGCTGGCGACGGCAGCGTGGGGGATTATCGCTCTGGTATGGCTTACC GTCCGGGTGATAAAGCGTCTGCAACAGCTTGAAAAACAGCAAAAGCAACAGCGTGAGGAAGCCGTTGATCCACTCAGCGT GGAGCTGAATGCCCAGCAGCGTTACCTTGATCGCTGGCTGCTGCGTCTGCAACACCATCTCGACAACCGCCGTTATCTGT GGCAGCTCCCCTGGTATATGGTTATCGGTCCGGCTGGCAGCGGTAAAACGGCGCTGCTGCGCGAGGGTTTTCCGTCTGAC ATTATTTATTCCCCTGAGGTGGTCCGTGGCGCGGAGCAGCGCCTGTATCTCATCCCGCACGTCGGGCAACAGGCGGTCAT ATTTGATATTGATGGCACACTTTGCGAACAGCCGGATGCCGATGTACTGCACCGCCGGTTATGGGAACACGCCCTGGACT GGCTGGCGGAGAAACGCACCCGCCAGCCACTGAACGGACTTATTCTGACACTTGATTTACCTGACCTGCTGACCACCGAC AAACGCCGCCGCGAGCATCTGTTACAGACGCTGCGCAGCCGTTTGCAGGATATCCGCCAGCATCTTCACTGCCAGTTACC GGTCTATGTGGTACTGACACGACTGGATCTGCTGCATGGTTTTGCCACGCTGTTTCAGTCACTGGAGAAAAAAGATCGCG ATGCCATTCTGGGTGTCACATTTACCCGTCGCGCCCATGAAAATGAAGACTGGAGAAGTGAACTCGATACCTTCTGGCAA ACCTGGTGCGACAGGATGAACCAGGCGCTGCCGGATCTGATGCTGGCACAGAGTCACATGCGCAGCTCCCTGTTCAGCTT TGCCCGCCAGATGCAGGGAAGCCGGGAATACCTGATGACGCTGCTGGATGGTTTGCTTGACGGCGAAAATATGGACGTCA TGTTGCGTGGCGTCTATCTCACCTCATCACTGCAACGTGGTCAGATGGATGATATTTTTACACAATCGGCTGCCCGGCAA TACCGACTGGGCAACAGCCCGCTGACGGCCTGGCCGCTGGTCGATACCACGCCTTATTTCACCCGCAATTTGTTTCCCCA GGCGTTACTGGCCGAACCGAATCTGGCCGGAGAAAGTCGTACCTGGCTGGTGAGTAGCCGTCGCCGCCTGACTGTCTTTT CCGCAACGGGCGGCGTGGCGGCGCTGATGCTCATCACCGGCTGGCACCATTATTACAAAACTAACTATGCTTCCGGCGTC CAGGTGCTTAAACAGGCCAAAGCGTTTATGGATATCACGCCGCCTCAGGGAATAGACGACTACGGTAACCTGCAACTGCC GCTGCTGAACCCGGTGCGTGACGCCACTCTGGCCTACGGCGACTGGGGCGACCGCAGCCGCCTGGCGGATATGGGTCTGT ATCAGGGGCTGCGTGTCGGGCCGTATGTGGAGCAAACCTATCTGCAACTGCTGGAGCAACGTTACCTGCCTGCCCTGTTT AACGGGCTGGTCAAAGAGATGAACGCCGCGCCCCCGGAAAGCGAGGAAAAACTTGCTGTGCTGCGTGTGATGCGAATGCT GGAAGATAAAAGCGGGCGGAACAATGAGGCTGTGAAGCAGTATATGGCGAAACGCTGGAGCGAACAATTCCACGGCCAGC GCGATATCCAGGCGCAACTGATGTCCCATCTTGATTACGCCCTCGCCCATACTGACTGGCACGCAGAGCGCCAGGCTGGA GACGGTGACGCCATCAGTCGCTGGACGCCGTATGACAAGCCCGTTGTGGCAGCACAGAAAGAACTGAGCAAGTTGCCGGT TTACCAGCGTGTTTACCAGAGCCTGAAAACACGGGCGCTGGGTGTACTGCCCGCCGACCTCAATCTGCGCGACCAGGTGG GACCGACCTTTGACCAGGTGTTTACGTCTGCCGATGACAGCAAACTTATCGTCCCGCAGTTTCTTACCCGCTATGGCTTA CAGAGCTACTTTGTGAAGCAGCGCGATGAACTGGTGGAGCTGACGGCAATGGATTCCTGGGTACTGAACCTGACACAAAG CGTGAAATACAGTGACGCTGACCGTGCAGAGATCCAGCGCCAGCTCACCGAACAGTATTTCAGTGATTATACAGCCACCT GGCGGGCAGGAATGGATAATCTTAACGTCCGGGATTATGAGTCCATTGCACAGTTGACCGGCGCACTGGAGCAGGTTATC AGTGGAGATCAGCCTTTGCAGCGGGCGCTGACCGCCCTGCGGGATAACACACAACCTGCGATACTATCCGACAAACTGGA TGATAAAGCCCGAGAAGAAGCACAGGCAGAACCGGATTACCGCCTGCTGACCCGCCTCGGCCATGAGTTCGCGCCAGAAA ACAGCACACTGGCGGTTCAGAAAGATAAAGAAAGCATGATGCAGGCAGTGTATCAGCAGTTAACAGAACTGCACCGCTAC CTGCTGGCGATCCAGAATGCGCCTGTACCGGGAAAATCGGCGCTGAAAGCCGTCCAGTTACGCCTTGACCAGAACAGCAG CGATCCTATCTTTGCCACCCGCCAGATGGCGAAAACCCTGCCCGCGCCACTTAACCGCTGGGTGGGAAAACTGGCCGATC AAGCCTGGCATGTGGTGATGGTGGAAGCCGTTCACTATATGGAAGTGGACTGGCGTGACAATGTGGTGAAACCGTTCAAT GAACAGCTTGCCGGTAACTATCCGTTTAATCCGCGTGCGACACAGGATGCCTCGCTGGATGCCTTCGAACGCTTCTTCAA ACCAGAGGGCTTGCTGGATACTTTCTATCAGCAGAATCTGAAACTGTTTATCGAAAATGATCTGAGCCGTGATGGCGATG ACGGGGTGATTATCCGCGAGGATATTATTCAGCAACTTGAAAACGCACAGAAAATTCGCGACATCTTCTTCAGCAAACAA AATGGCCTGGGAACACAGTTTGCGGTGGAAACAGTCTCACTTTCCGGTAACAAACGCCGCAGCGTGCTGAACCTCGACGG CCAGTTAGTGGACTACAGCCAGGGTCGTAATTATACCGCCCATCTGGTATGGCCGAACAATATGCGGGAAGGTAATGAAA GCAAACTGACACTGATTGGAACCAGTGGCGGAGCACCGCGCAGCCTCAGCTTCAGCGGCCCGTGGGCGCAGTTCCGCCTG TTCGGAGCCGGACAGCTAACCGGGGTACAGGACGGCAACTTTACCGTACGCTTTAGCGTGGACGGTGGCGCAATGGTGTA TCGAGTACACACTGACACTGAAGACAACCCGTTCAGCGGTGGGCTGTTCAGCTTATTTAAGCTGCCAGATACATTGTACT GA Protein sequence : MFRLTTPRIFSSLRTMLRPAMPRFKVSAFWLLILAWIFLLVWIWWKGPTWTLYGEHWLKPLTNRWLATAAWGIIALVWLT VRVIKRLQQLEKQQKQQREEAVDPLSVELNAQQRYLDRWLLRLQHHLDNRRYLWQLPWYMVIGPAGSGKTALLREGFPSD IIYSPEVVRGAEQRLYLIPHVGQQAVIFDIDGTLCEQPDADVLHRRLWEHALDWLAEKRTRQPLNGLILTLDLPDLLTTD KRRREHLLQTLRSRLQDIRQHLHCQLPVYVVLTRLDLLHGFATLFQSLEKKDRDAILGVTFTRRAHENEDWRSELDTFWQ TWCDRMNQALPDLMLAQSHMRSSLFSFARQMQGSREYLMTLLDGLLDGENMDVMLRGVYLTSSLQRGQMDDIFTQSAARQ YRLGNSPLTAWPLVDTTPYFTRNLFPQALLAEPNLAGESRTWLVSSRRRLTVFSATGGVAALMLITGWHHYYKTNYASGV QVLKQAKAFMDITPPQGIDDYGNLQLPLLNPVRDATLAYGDWGDRSRLADMGLYQGLRVGPYVEQTYLQLLEQRYLPALF NGLVKEMNAAPPESEEKLAVLRVMRMLEDKSGRNNEAVKQYMAKRWSEQFHGQRDIQAQLMSHLDYALAHTDWHAERQAG DGDAISRWTPYDKPVVAAQKELSKLPVYQRVYQSLKTRALGVLPADLNLRDQVGPTFDQVFTSADDSKLIVPQFLTRYGL QSYFVKQRDELVELTAMDSWVLNLTQSVKYSDADRAEIQRQLTEQYFSDYTATWRAGMDNLNVRDYESIAQLTGALEQVI SGDQPLQRALTALRDNTQPAILSDKLDDKAREEAQAEPDYRLLTRLGHEFAPENSTLAVQKDKESMMQAVYQQLTELHRY LLAIQNAPVPGKSALKAVQLRLDQNSSDPIFATRQMAKTLPAPLNRWVGKLADQAWHVVMVEAVHYMEVDWRDNVVKPFN EQLAGNYPFNPRATQDASLDAFERFFKPEGLLDTFYQQNLKLFIENDLSRDGDDGVIIREDIIQQLENAQKIRDIFFSKQ NGLGTQFAVETVSLSGNKRRSVLNLDGQLVDYSQGRNYTAHLVWPNNMREGNESKLTLIGTSGGAPRSLSFSGPWAQFRL FGAGQLTGVQDGNFTVRFSVDGGAMVYRVHTDTEDNPFSGGLFSLFKLPDTLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec30 | YP_851415.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 79 |
| aec30 | AAQ96724.1 | Aec30 | Not tested | AGI-1 | Protein | 0.0 | 79 |
| pmt1 | AAN64194.1 | Pmt1 | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 57 |
