Gene Information

Name : D782_3632 (D782_3632)
Accession : YP_007341736.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Unknown
Product : Rhs element Vgr protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3769960 - 3772194 bp
Length : 2235 bp
Strand : -
Note : PFAM: Phage-related baseplate assembly protein; Phage late control gene D protein (GPD); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein

DNA sequence :
ATGTCATTAAAAGGGCTGCGTTTTACGCTGACGGTGGACGGACTGGTGCCGGAGACGTTTGCGGTGGTGGATTTCCGCCT
CACCCAGGCATACTCATCGCCGTTCGTCCTGGATGTGGATGTCGCCAGCGACTCGTTCCGCCAGACGGCGGAGAAGCTGC
TGGAGAAAGGGGCCGTGCTGACCATCTGGCAGGGCAGCACGGCGCTGCGTTATGTCAGCGGTGTGGTGTCGGGGTTCGGG
ATGAAGGAGCACAACGGCTGGCAGATGCAGTACCACCTTCAGATACGCCCGCCCCTGTGGCGCAGCGGACTGCGGCAGAA
CTACCGAATCTTCCAGCAGCAGGACATTAAAGCCATCTCCGCCACGCTGTTAAACGAGGACGGAGTGACGCAGTGGACGC
CGCGCTTTTATGAGAGCCACCCGGCCCGGGAGTTCTGCGTCCAGTACGGTGAAAGCGACCTGGCGTTTCTGACCCGGCTG
TGGGCGGAGGAAGGTATCTTCTTTTATGACAGATACGCTGACGACAGCCCGGAGCAGACGCTCACGCTCTGCGATGATGT
GGCGGGTCTGCCGGTGTACGGGGAGATACCGTTTAACCCGAACACCCGCGAGGTGACGACGGCGTGTATCAGCCTGTTCC
GCTACCAGGCGCAGGTGCGCCCCTCGCAGGTGCGTTCAAAAGACCACACGTTTAAGGTGCCGGACTGGCCGGGTATTTAC
ATTGAGGATGCTGAAAACCTCAACGGGCAGTTAACGCAGTACAAAATTCTGGACTGGCCGGGGCGCTACAAGGACGAGCA
GCACGGTCAGGACTTTACCCGCTACCGGCTGGAAGGGCTGCGTAACAGTGCTGAAACCGCCACAGGCATCAGTAACTCCC
CGGCGCTGTGGCCGGGACGGCGGTTCACCCTGACGGGGCATCCGGTACAGGGCGCGAACCCGAACCGTGAGTGGCAGGTG
GTGAGCAGCACGCTGACGGGGAGCCAGCCGCAGGCGCTGCACGGGAGCCGGGGGCGGGGAACGACGCTGAGTAACCATAT
CACGGTCATCCCGGCAGACCGGACCTGGCGCTCACAGCCCCTGCCGAAGCCGAAGGTGGACGGTCCGCAGAGTGCTGTTG
TCACCGGGCCGGAGGGGGAGGAGATATTCTGCGACGAACACGGGCGGGTGCGGGTGAAGTTTCACTGGGACCGTTATCAC
GGGGAGACGGAGGAGAGTTCGTGCTGGATACGGGTGTCGCAGGCGTGGGCGGGAGCGGGGTTCGGTAATCTGGCGATACC
GCGCGTGGGTCAGGAAGTGATAGTGGACTTTCTGAACGGCGACCCGGACCAGCCCATTGTGACGGGACGTACCTACCATG
AGGACAACCGTTCACCGGGCGACCTGCCGGGAACGAAGACGCAGATGACCATTCGCTCAAAAACGTACAAGGGCAGCGGC
TTTAATGAACTGCGGTTCGAGGACGCCACCAGTAATGAGCAGGTGTATATCCACGCGCAGAAGAACATGGATACGGAGGT
GCTTAACGACCGGACGACGGACGTGAAGCATGACCACACGGAGACCATCGGGAACAACCAGAAAATCACGGTGGGGCTGG
GCCAGACGGTCAAAGTCGGGAAAGAGAATGCCGGGGGACATGACCAGACCATCACGGTGGCCCATGACCGCATCATCACG
GTGCGTAATGACCAGACGCTGAAGGTGATGAACGACCGGCGGGTGAACGTCAGTCACGATGACGGTCTGTACGTGGCGAA
TGACCGAAAGGTGACGGTGGAAGGCAAACAGGAGCACAAAACGACGGGGAACCACATCAGCCTGGTGGAGGGGAAGCACA
GCCTGGAGGTGAAGGGCGACCTGGCGAGGAAAATTACCGGTGCGCTGGGAATGAAGGTCCGGGATGAAATCGTGCTGGAG
AGTGGCGGGAAAATCACTCTGAAGGTGGGCGGTTCGTTTGTGGTCATCCATTCTGGTGGCGTGGATATTGTGGGGCCGAA
GATTAATCTGAATGGCGGGGGAAGTCCGGGGACGCCAGTACCGACGCTACAACCGGCGGTTCTGAAAGCGCTGGCAGATG
ATAAAAGTTTAGCGGCTGAGCAAAATGATAGTAATGCATCGTCCGATCAGAATGATAACAACGATGAGGGTGAGGAAGCG
CCAGAAAAATCGGTGTGTAAGGAGTGCCTGAAAAGGGCGCAAGAAGCCGCCGCCGCTTTTGCGCCTCGTGGATAA

Protein sequence :
MSLKGLRFTLTVDGLVPETFAVVDFRLTQAYSSPFVLDVDVASDSFRQTAEKLLEKGAVLTIWQGSTALRYVSGVVSGFG
MKEHNGWQMQYHLQIRPPLWRSGLRQNYRIFQQQDIKAISATLLNEDGVTQWTPRFYESHPAREFCVQYGESDLAFLTRL
WAEEGIFFYDRYADDSPEQTLTLCDDVAGLPVYGEIPFNPNTREVTTACISLFRYQAQVRPSQVRSKDHTFKVPDWPGIY
IEDAENLNGQLTQYKILDWPGRYKDEQHGQDFTRYRLEGLRNSAETATGISNSPALWPGRRFTLTGHPVQGANPNREWQV
VSSTLTGSQPQALHGSRGRGTTLSNHITVIPADRTWRSQPLPKPKVDGPQSAVVTGPEGEEIFCDEHGRVRVKFHWDRYH
GETEESSCWIRVSQAWAGAGFGNLAIPRVGQEVIVDFLNGDPDQPIVTGRTYHEDNRSPGDLPGTKTQMTIRSKTYKGSG
FNELRFEDATSNEQVYIHAQKNMDTEVLNDRTTDVKHDHTETIGNNQKITVGLGQTVKVGKENAGGHDQTITVAHDRIIT
VRNDQTLKVMNDRRVNVSHDDGLYVANDRKVTVEGKQEHKTTGNHISLVEGKHSLEVKGDLARKITGALGMKVRDEIVLE
SGGKITLKVGGSFVVIHSGGVDIVGPKINLNGGGSPGTPVPTLQPAVLKALADDKSLAAEQNDSNASSDQNDNNDEGEEA
PEKSVCKECLKRAQEAAAAFAPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 69
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 0.0 69
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 1e-132 48