Gene Information

Name : D782_3301 (D782_3301)
Accession : YP_007341419.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : P pilus assembly protein, porin PapC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3395334 - 3397925 bp
Length : 2592 bp
Strand : -
Note : PFAM: Type VII secretion system (T7SS), usher protein; PapC C-terminal domain; PapC N-terminal domain

DNA sequence :
ATGAAGCCAGGGCAGGCCGACACCATGAAAAACCTTCACCCGCTCAGTATGCTGACGCTGGCTGTGATGGCGGCGCTCTG
GTCACCCAACGGGCGCGGCGAGAGCTACTTTAACCCCGCATTTTTGTCCGAAGATACGGCCTCGGTGGCCGATCTTTCGC
GTTTTGAGCAGGGGCATCAGCAAGCGCCGGGCGTGTATCGCGTCGATATCTGGCGTAACGATGAATTTATCGGCACCCAA
GATCTCACCTTTGTCGCCGCCGAAGGGGCGGCCCCTCCCGCTGCGGGCCTCGCGCCCTGTATTCAGCGCGATTTCTTACA
GCGTTTGGGCGTCAACATGACGGCCTTCCCGGCGCTGGCGAGTGAACCGAAAGAGAGCTGCGTGGCGCTGGAAAACCTGC
TGCCAGGTAGCGTCGTGGCGTTTGATTTCGCCTCGTTACGCCTGCGACTCAGCCTGCCACAGGCGGCGATGAGCAACAGC
GCGCGCGGTTATATTCCGCCGGAGGATTGGGATGAAGGCATTCCAGCGCTGCTGTTGAACTATAGCCTGACCGGCAACAA
AGGCAGCGATGACGACAGTCACTATCTCAACTTGCAAAGCGGCCTGAACTACGGCCCGTGGCGGCTGCGTAATAACGGCG
CGTGGCGCTATACCCGTAATAACGGACAGCGCCATAGCGAATGGGAAAATATCGGTACCTGGCTACAGCGCTCGATTATC
CCGCTGAAAAGCGAAATGGTGCTGGGCGACAGCAATACCGGCAATGACGTGTTCGACAGCATCGGTTTTCGCGGTGGCCG
GCTTTACTCCTCAGACAGTATGTATCCGGACAGCTTGCAGGGCTACGCGCCGACCGTCCGCGGGATTGCGCGTACGCCAG
CGAAGGTGGTGATCCGCCAGAACGGCTATGTGATTTATCAAAGCTACGTGCAGCCGGGCGCCTTTGCGATTAGCGACCTG
AACCCAACCTCTTCGAGCGGTGACCTGGAGGTGACCGTGGAGGAGAAAGACGGTAGCCAGCAGCGCTATACCGTACCCTA
TTCCACGGTGCCGTTGCTGCAACGCGAAGGGCGGCTGAAGTATGACCTGGTCGCCGGGGAGTATCGCAGCGGTAATAGCC
AGAAAGATACGCCGTTCTTTGGTCAGGGAACGATGATTGTCGGCCTGCCGGGCGGTTATACCGTTTACGGTGGCACGCAG
ATGGCATCGCGCTACGCGGCAGCAGCCATTGGTGCGGGAAAAAATCTCGGCGACTGGGGCGCGATTTCTCTCGATGTGAC
CCATGCGCGCAGCCAGTTAGCAGACGACAGCTGGCATGAAGGCCAGTCTCTGCGTTTCCTGTACGCGAAATCCCTGAATG
GCTACGGCACCAACTTCCAGCTTCTGGGTTATCGCTACTCGACGCGCGGTTTTTATACCCTTGATGACGTGGCGTGGAAA
CGGATGTCCGGGTATGAGTATTCCGAAACGGAAAACGATAAAAACGGCGTGCCGGATGTGGTGAGTTATCACAACCTCAC
CTGGAGTAAAAAAGGGCGTTTCCAGGTCAATATTTCGCAATCGCTGGGGGATTACGGTTCGGTGTATCTCTCCGGTAGCG
AGCAAACCTACTGGGGAACCAGCGATTCCAATATCTGGTATCAGCTTGGCTATGCCGGCGGCTGGAAAGGCATAAGCTAC
TCGCTGAGCTGGTCGTGGAACCGGTCGGTGGGTATCGACGGCACCGATCGTATTGTTTCTGCGAACGTCTCCATTCCGTT
CAGCCTGTTTACGCCGAATGGCTATCGTCGCGATAGCGTACTGGACCGCGCCTATGCCACCGCCTCCGCCAGCCGTAATA
AAGACGGCGATAGCAGCTGGCAAACCGGCGTCAGCGGCACGCTGCTGGAAGGTCGCAACCTGAACTATAGCGTGACGCAG
GGCCATACCAGCAACAACGGCTCCAGCGGCAGTGCTTCAGCCAACTGGCAGGCGACGTACGCTACGGTTGGCGCAGGCTA
CAACTACTCCCGTGACCAGCATGACTTTAACTGGCAACTGGCCGGTGGCGTGGTCGGTCATGCCGATGGCGTGACGTTCA
GCCAACCGCTGGGCGATACCAACGTGCTTATCAAAGCGCCGGGCGCCAGCGGAGTGAAAGTCGAAAACCAGACCGGGGTG
AAAACCGACTGGCGCGGCTACGCCATCATGCCTTACGCCACGGTGTATCGCTATAACCGCGTGGCGCTCGATACCAATTC
CATGAATGACCACACGGACGTGGAAAATAACGTCAGCAGCGTGGTGCCAACCCGTGGCGCGCTGGTGCGTGCGGCGTTTG
ATACGCGAATTGGCGTGCGTGCGCTGATCACCGCGCGCCGGGGCGATCGTTTTGTGCCGTTTGGCGCGATTGTGCGCGAG
GTCAACAGCGGCGTCACCAGCATGGCGGGCGAAGAGGGGCAAATTTACCTTAGCGGTCTGCCATTGAGCGGCGAGCTGCT
TATTCAATGGGGCGACAGTGCGCAGGAACGCTGCCGGGCGACCTATACGCTCCCGCAGGAGAGTTTAAATCAGGCGATTA
CCATGATGGGAGCACGCTGTGAACGTGAATAA

Protein sequence :
MKPGQADTMKNLHPLSMLTLAVMAALWSPNGRGESYFNPAFLSEDTASVADLSRFEQGHQQAPGVYRVDIWRNDEFIGTQ
DLTFVAAEGAAPPAAGLAPCIQRDFLQRLGVNMTAFPALASEPKESCVALENLLPGSVVAFDFASLRLRLSLPQAAMSNS
ARGYIPPEDWDEGIPALLLNYSLTGNKGSDDDSHYLNLQSGLNYGPWRLRNNGAWRYTRNNGQRHSEWENIGTWLQRSII
PLKSEMVLGDSNTGNDVFDSIGFRGGRLYSSDSMYPDSLQGYAPTVRGIARTPAKVVIRQNGYVIYQSYVQPGAFAISDL
NPTSSSGDLEVTVEEKDGSQQRYTVPYSTVPLLQREGRLKYDLVAGEYRSGNSQKDTPFFGQGTMIVGLPGGYTVYGGTQ
MASRYAAAAIGAGKNLGDWGAISLDVTHARSQLADDSWHEGQSLRFLYAKSLNGYGTNFQLLGYRYSTRGFYTLDDVAWK
RMSGYEYSETENDKNGVPDVVSYHNLTWSKKGRFQVNISQSLGDYGSVYLSGSEQTYWGTSDSNIWYQLGYAGGWKGISY
SLSWSWNRSVGIDGTDRIVSANVSIPFSLFTPNGYRRDSVLDRAYATASASRNKDGDSSWQTGVSGTLLEGRNLNYSVTQ
GHTSNNGSSGSASANWQATYATVGAGYNYSRDQHDFNWQLAGGVVGHADGVTFSQPLGDTNVLIKAPGASGVKVENQTGV
KTDWRGYAIMPYATVYRYNRVALDTNSMNDHTDVENNVSSVVPTRGALVRAAFDTRIGVRALITARRGDRFVPFGAIVRE
VNSGVTSMAGEEGQIYLSGLPLSGELLIQWGDSAQERCRATYTLPQESLNQAITMMGARCERE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 5e-180 49
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 2e-180 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3301 YP_007341419.1 P pilus assembly protein, porin PapC VFG0446 Protein 0.0 73
D782_3301 YP_007341419.1 P pilus assembly protein, porin PapC VFG1645 Protein 3e-180 49
D782_3301 YP_007341419.1 P pilus assembly protein, porin PapC VFG0912 Protein 4e-180 49
D782_3301 YP_007341419.1 P pilus assembly protein, porin PapC VFG0876 Protein 4e-179 47
D782_3301 YP_007341419.1 P pilus assembly protein, porin PapC VFG0454 Protein 2e-153 43