Gene Information

Name : D782_3277 (D782_3277)
Accession : YP_007341396.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Unknown
Product : Rhs element Vgr protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3367716 - 3370103 bp
Length : 2388 bp
Strand : -
Note : PFAM: Phage-related baseplate assembly protein; Phage late control gene D protein (GPD); Gp5 C-terminal repeat (3 copies); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein

DNA sequence :
ATGGCCTTACAGGGATTACGTTTTACGCTGACGGTGGACGGACTGGTGCCGGAGACGTTCGCGGTGGTGGATTTCCGCCT
CACGCAGGCATATTCATCGCCGTTCGTCCTGGATGTGGCTGTCGCCAGCGACTCGTTCCGCCAGACGGCGGAGAAGCTGC
TGGAGAAAGGGGCCGTGCTGACCATCTGGCAGGGCAGCACGGCGCTGCGTTATGTCAGCGGTGTGGTGTCGGGGTTCGGG
ATGAAGGAGCACAACGGCTGGCAGATGCAGTACCACCTTCAGATACGCCCGCCCCTGTGGCGCAGCGGACTGCGGCAGAA
CTACCGAATCTTCCAGCAGCAGGACATTAAAGCCATCTCCGCCACGCTGTTAAACGAGGACGGAGTGACGCAGTGGACGC
CGCGCTTTTATGAGAGCCACCCGGCCCGGGAGTTCTGCGTCCAGTACGGTGAAAGCGACCTGGCGTTTCTGACCCGGCTG
TGGGCGGAGGAAGGTATCTTCTTTTATGACAGATACGCTGACGACAGCCCGGAGCAGACGCTCACGCTCTGCGATGATGT
GGCGGGTCTGCCGGTGTACGGGGAGATACCGTTTAACCCGAACACCCGCGAGGTGACGACGGCGTGTATCAGCCTGTTCC
GCTACCAGGCGCAGGTGCGCCCCTCGCAGGTGCGTTCAAAAGACCACACGTTTAAGGTGCCGGACTGGCCGGGTATTTAC
ATTGAGGATGCTGAAAACCTCAACGGGCAGTTAACGCAGTACAAAATTCTGGACTGGCCGGGGCGCTACAAGGACGAGCA
GCACGGTCAGGACTTTACCCGCTACCGGCTGGAAGGGCTGCGTAACAATGCTGAAACCGCCACAGGCATCAGTAACTCCC
CGGCGCTGTGGCCGGGACGGCGGTTCACCCTGACGGGGCATCCGGTACAGGGAGCGAACCCGAACCGTGAGTGGCAGGTG
GTGAGCAGCACGCTGACGGGGAGCCAGCCGCAGGCGCTGCACGGGAGCCGGGGGCGGGGAACAACGCTGGATAACCATAT
CACGGTCATCCCGGCAGACCGGACCTGGCGCTCACAGCCCCTGCCGAAGCCGAAGGTGGACGGTCCGCAGAGTGCTGTTG
TCACCGGGCCGGAGGGAGAGGAAATCTTCTGCGACGAACACGGGCGGGTGCGGGTGAAGTTCCACTGGGACCGTTATCAC
GGGATGACGGAGGCGAGTTCGTGCTGGATACGGGTGTCGCAGGCGTGGGCGGGACCGGGGTTCGGTAACCTGGCGATACC
GAGAACCGGGCAGGAAGTGATAGTGGACTTTCTGAACGGCGACCCGGACCAGCCCATCGTCACGGGCCGGGCGTACCATG
AGGACAACCGTTCGCCGGGCGACCTGCCGGGAACGAAGACGCAGATGACCATCCGGTCGAAAACGTACAAGGGCAGCGGC
TTTAATGAACTGCGGTTCGAGGACGCGACGGACAGTGAGCAGGTGTATATCCATGCGCAGAAGAACATGGACACGGAGGT
GCTTAACGACCGGACGACGGACGTGAAGCATAACCACACGGAGACCATCGGCAACAACCAGAAAATCACGGTGGGGCTGG
GCCAGACGGTCACAGTCGGGAAAGAGAATGCCGGGGGCCATGACCAGACCATCACGGTGGCCCATGACCGGAGTATCACG
GTGCGCAATGACCAGACGCTGAAGGTGACGAACGACCGGACGGTGAGCGTGAGTCACGATGACGGTCTGTACGTAAAAAA
TGACCGCAGGGTGACGGTGGAAGGGAAGCAGGAACACGAAACGACGGGGAACCACATCAGCCTGGTGGAAGGGAAGCACA
GCCTGGAGGTGAAGGGCGACCTGGCGGAGAAGGTGAGTGGCGCGCTGGGGATAAAGGTGGACGGGGATATCGTGCTGGAG
AGCAGCAGCCAGATAAGCCTGAAAGTGGGCGGCTCGTTCGTGGTGATAAGCTCTGGTGGCGTGGATATCGTGGGGCCGAA
GATAAATCTGAATGGCGGCGGTAGCCCGGGAAAGCCAGTGGAGACTCTGCAACAGGTGGTGCTGGAGGATCCGGAGGATG
AAGTGGAAGAGGGGAAAAGTAGCGATAGTTGCGGACCGAATAAAGCGAATAGAAACTTAGGAGGCTCTGAACAAGGTCCA
GATAGTTCAGATGAGGGAAAAGATCAATATCGCTTAAGATTTTTAATAAGAGATGATGCTCAGAATCCTTATACTCTGAA
AGACTATATAGTATTTTTACCTGAAGGAAAGCAAATCACCGGGAAAACTGACGGATATGGTTATACAGAGATATTTTATA
CAGACAGACCTGATGATGTTTTAATTGATGTACTGTTGGGTAATAATCAGTGGGAGATAAAACAATGA

Protein sequence :
MALQGLRFTLTVDGLVPETFAVVDFRLTQAYSSPFVLDVAVASDSFRQTAEKLLEKGAVLTIWQGSTALRYVSGVVSGFG
MKEHNGWQMQYHLQIRPPLWRSGLRQNYRIFQQQDIKAISATLLNEDGVTQWTPRFYESHPAREFCVQYGESDLAFLTRL
WAEEGIFFYDRYADDSPEQTLTLCDDVAGLPVYGEIPFNPNTREVTTACISLFRYQAQVRPSQVRSKDHTFKVPDWPGIY
IEDAENLNGQLTQYKILDWPGRYKDEQHGQDFTRYRLEGLRNNAETATGISNSPALWPGRRFTLTGHPVQGANPNREWQV
VSSTLTGSQPQALHGSRGRGTTLDNHITVIPADRTWRSQPLPKPKVDGPQSAVVTGPEGEEIFCDEHGRVRVKFHWDRYH
GMTEASSCWIRVSQAWAGPGFGNLAIPRTGQEVIVDFLNGDPDQPIVTGRAYHEDNRSPGDLPGTKTQMTIRSKTYKGSG
FNELRFEDATDSEQVYIHAQKNMDTEVLNDRTTDVKHNHTETIGNNQKITVGLGQTVTVGKENAGGHDQTITVAHDRSIT
VRNDQTLKVTNDRTVSVSHDDGLYVKNDRRVTVEGKQEHETTGNHISLVEGKHSLEVKGDLAEKVSGALGIKVDGDIVLE
SSSQISLKVGGSFVVISSGGVDIVGPKINLNGGGSPGKPVETLQQVVLEDPEDEVEEGKSSDSCGPNKANRNLGGSEQGP
DSSDEGKDQYRLRFLIRDDAQNPYTLKDYIVFLPEGKQITGKTDGYGYTEIFYTDRPDDVLIDVLLGNNQWEIKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 0.0 70
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 70
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 6e-131 49