Gene Information

Name : D782_3265 (D782_3265)
Accession : YP_007341386.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Resistance
Product : transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3357761 - 3358105 bp
Length : 345 bp
Strand : -
Note : PFAM: Helix-turn-helix domain

DNA sequence : 
ATGACTATTTCCGCTCAGGTTATCGACACTATCGTTGAGTGGATCGATGACAACCTGCACCAACCGCTTCGCATTGACGA
TATCGCACGTCACGCGGGCTACTCGAAATGGCACCTGCAACGACTCTTTTTGCAGTACAAAGGCGAGAGTCTGGGGCGCT
ATATACGCCAGCGCAAACTCAGCCTGGCAGCGCAGGAACTGCGGACGACCAATCAGCGCGTGTATGATATTTGTCTGAAA
TATGGCTTCGATTCGCAGCAGACATTTACCCGCGTTTTCACCCGCACGTTTAACCAGTCACCGGGGGCGTATCGTCGGGA
GAATTATTGTAGCCAGATGCATTAG

Protein sequence : 
MTISAQVIDTIVEWIDDNLHQPLRIDDIARHAGYSKWHLQRLFLQYKGESLGRYIRQRKLSLAAQELRTTNQRVYDICLK
YGFDSQQTFTRVFTRTFNQSPGAYRRENYCSQMH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 8e-20 54
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 2e-17 50
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 2e-17 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain CP001138.1.gene612.p Protein 2e-37 87
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain CP001138.1.gene4488. Protein 3e-20 54
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain CP001918.1.gene327.p Protein 1e-20 52
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain CP000647.1.gene4499. Protein 1e-20 52
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain BAC0371 Protein 3e-19 51
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain NC_002695.1.914293.p Protein 3e-19 51
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain CP000034.1.gene4505. Protein 5e-19 50
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain NC_010558.1.6276025. Protein 8e-18 50
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain CP000647.1.gene1624. Protein 2e-17 48
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain CP001918.1.gene2033. Protein 8e-18 47
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain CP001138.1.gene1637. Protein 9e-18 46
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain BAC0560 Protein 7e-18 45
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain NC_002695.1.917339.p Protein 7e-18 45
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain CP000034.1.gene1596. Protein 7e-18 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain VFG0585 Protein 2e-20 54
D782_3265 YP_007341386.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain VFG1038 Protein 8e-18 50