Gene Information

Name : D782_3068 (D782_3068)
Accession : YP_007341205.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3153639 - 3154310 bp
Length : 672 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGAAAATTTTAGTCGTGGAAGATGACGCGCTGTTATTGCAGGGCTTAATTCTGGCGATGCAAAGCGAAGGGTACGCCTG
CGATGGTGTCACCACCGCACGTCAGGCGGAACTCAGCCTGCAATCCGGGCTCTATAGTTTGATCGTGCTGGATTTGGGCC
TGCCAGACGAAGATGGATTGCATTTCCTCTCGCGCATCCGTCAGGAAAAATGTAGCCTTCCGGTGCTAATTTTGACCGCC
CGAGATACCCTGGACGATCGTATCAGCGGCCTGGACACCGGCGCGGACGATTACCTGGTTAAACCTTTTGCCCTGGAAGA
ACTCAACGCCCGTATCCGTGCGCTGTTGCGTCGTCATTACAATCAGGGCGAAAACGAAGTCACGGTGGCGAACTTACGTC
TTAACACCACGCGTCGTCAGGTCTGGCTGGACGAACAACCGCTGGAGCTGACGCCAAAAGAGTTTGCCCTGCTCTCGCGC
CTGATGCAGAAAGCCGGAAGCCCGGTACATCGCGAAATTCTCTACAACGATATCTACAACTGGGACAACGAGCCGTCGAC
CAATACGCTGGAAGTGCATATTCACAACCTGCGCGATAAAGTCGGCAAGTCACGTATTCGCACAGTAAGAGGCTTTGGCT
ACCAGCTGGAAAACAGCGAGGTAACCGACTAA

Protein sequence : 
MKILVVEDDALLLQGLILAMQSEGYACDGVTTARQAELSLQSGLYSLIVLDLGLPDEDGLHFLSRIRQEKCSLPVLILTA
RDTLDDRISGLDTGADDYLVKPFALEELNARIRALLRRHYNQGENEVTVANLRLNTTRRQVWLDEQPLELTPKEFALLSR
LMQKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRGFGYQLENSEVTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-39 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3068 YP_007341205.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 6e-59 61
D782_3068 YP_007341205.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002516.2.879194.p Protein 5e-30 41
D782_3068 YP_007341205.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0533 Protein 2e-19 41
D782_3068 YP_007341205.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.915041.p Protein 1e-19 41
D782_3068 YP_007341205.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene4257. Protein 2e-19 41
D782_3068 YP_007341205.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3834. Protein 1e-19 41
D782_3068 YP_007341205.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene4273. Protein 7e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3068 YP_007341205.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 6e-85 84
D782_3068 YP_007341205.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 2e-29 41