|
Name : D782_2874 (D782_2874) Accession : YP_007341012.1 Strain : Enterobacteriaceae bacterium FGI 57 Genome accession: NC_020063 Putative virulence/resistance : Virulence Product : P pilus assembly protein, porin PapC Function : - COG functional category : - COG ID : - EC number : - Position : 2933157 - 2935751 bp Length : 2595 bp Strand : - Note : PFAM: Type VII secretion system (T7SS), usher protein; PapC C-terminal domain; PapC N-terminal domain DNA sequence : ATGTCGAGTATCTCACGCCAGCGCTGCCATCTGCTAATCAGTACGATCCCCTCCTTTTTGGGCGGGCTGGCGGTCTTCGC TTCAACGTCGCTGAGCGCGCTGGCCGACACCTGGTTTGATCCCGCGTTCTTTAAAGACGATCCGTCGCTGGTCGCCGACC TTTCACGTTTTGAAAAAGGGCAGCAAATTGCGCCCGGTAAGTACCGGGTTGATGTCATTTTCAACCAAAGCTTCGTTGCT ACCCGCGATATCGAATTTGTTGCCAATGAAGACAATCATCAGGTTGAACCCTGTCTCAATAAAGTCTATCTCAGCCAAAT TGGCGTCAATACCGCCGCGTTTCCGGCGTTTAACGCGCTGGATGACGACGCTTGCGTGCCGCTGGCGAAAGTTATTCCCG ACGCCAGCGTCAAATTTGAGGCCAGACAGCTCAGGCTGGAGATTTCTGTACCGCAAATTGCCGTCAAAAATGATGCCAGG GGCTATGTTCCACCCGAACGATGGGATCGCGGAATTAACGCCTTGCTGCTGGGATACTCCTTCAGCGGCGCGAATGGCGT GCAGAGCAGCAACGAAAATGGCGGCGATAATGACTACTTCCTGAATCTGAACAGTGGCTTGAATCTTGCGGGCTGGCGAT TACGCAATAACTCAACCTGGAGCTATGGTCAGGATGAACCGGGCCTGTGGCAGAATATCAGCAGCTATGCGCAGTACGCG ATTATTCCCATCAAAGGCGAATTAACCGTCGGAGACAGCTACACCGGGGGCGATTTTTTTGATAGCGTCGGTTTTCGCGG CGTACAGCTTGCCTCTGATGACAACATGCTGCCCGATAGCCTGCGCGGATTTGCACCTACCGTTCGCGGTATTGCCAAAA GCAATGCTCAGGTGACCATTAAACAGAATGGCTATACGGTGTATCAAACGTACGTGCCGCCCGGCGCGTTTGAAATTAAC GACCTGTTTTCCAGCGCCTCCAGCGGCGACCTGCAGGTTGAAATTAAAGAGTCAGACGGCACCCTCAATCGTTACACCAT TCCTTACTCCAGCGTACCGCTTCTCCAGCGTCAGGGTCGATTAAAATACGCCCTGACCGCCGCGAATTATCGCAGTAACA GCAACGATCAAGATGAAAAAGCGTTTGCACAGGCGACGCTGCAATGGGGGGGGCCCTGGGGCGTGACCTGGTATGGCGGT GGGCAGTTCTCTGATGATTACCGTGCGGGCATGCTGGGGATGGGGTTTAACCTCGGTGAACTTGGCGCGGTTTCGGTTGA TGGCACGTGGGCGAACAGTACGCTGGCCAATAATCAGGATTATCAGGGGCAATCCTGGCGGTTTTTGTATGCAAAAACGC TTAACGCCTATGGCACCAATTTCCAGTTGATGGGCTACCGCTATTCCACGTCCGGCTTTTACACCCTTGCCGATACCATG TATCACCGCATGGAAGGGTATACGCAGAGCGATAACGATGAAACACCGCTGTGGGCGCGCTACTACAACCTCTACTACAG CAAGCGCGGGAAGCTGCAAATGAATATTTCCCAGCAGCTTGGCGACTACGGCTCATTCTACCTGAGCGGTAGTGAGCAAA CTTACTGGAACACCGACGACCAGGATAGGTTATTGCAATTCGGCTACAACACGCAGATCAAGGATGTCACGCTGGGGTTG TCGTGGAACTACAGCCAGTCTCGCGGGCAACCGTCCGCTGATCAGGTCTTCGCGCTTAACGTCTCACTACCGCTGGGCCA GTGGCTATCCTCGTCCAGCGGCGATATAAACAGCCGAGGCCACTCAGCCTGGATGACCTCGAATACCAGCGCCGACAATG ACGGCAATGTGACGCAAAACGTCGGTGTTTCCGGCTCATTACTGGAAGACGACAAACTCAGCTATAGCGTGCAACAGGGC TACGTCAGCCAGGGCGAGAGCGCCAGCGGAAACGCGAGCCTGGATTACAAAGGCGCGTGGGGCGAATCGAAAGTGGGTTA CAACTACAGCGACAACGGCAATCAGCAGCAGGTGAACTATGGGTTATCCGGCAGCGTGATTGTGCATTCTGAAGGCATCA CGCTCGGCCAATCGCTGGGCGAAACCAACGTGCTGGTTTCGGCGCCCGGCGCGGAGAACACCAAAGTGGCCAACTACACC GGTATCAGTACGGATGGGGAAGGCAATTCACTATTGCCCTATGCCACGCCGTACCGTGAAAACCGTATTGCCCTGGACAC CGCCTCTTTAAAACAAAATGTGGATATCGAAAACGCCGTGGTGAACGTGGTACCCACCAAAGGTGCGCTGGTTCGCGCGA GGTTCAGCGCTCACGTTGGCGCGCGGGTGCTATTCAGCCCGCTAATGAACGGTAAGCCTTTACGCTTTGGCGCAATGGCA ACCCTGGACGATGCGGACAAGATTAGCGGCATTGTGGATGATGACGGTTCGCTTTATATGTCTGGCCTGCCTGAAAAGGG AACGATCACCGTACGCTGGGGCGAGGCGCGCGAGCAACAGTGCCAGCTGAAATTTACCTTAACGGTGCAACAGATGGCCG CACCCATTACGCGCAGAAATGCAGTATGCGAATAA Protein sequence : MSSISRQRCHLLISTIPSFLGGLAVFASTSLSALADTWFDPAFFKDDPSLVADLSRFEKGQQIAPGKYRVDVIFNQSFVA TRDIEFVANEDNHQVEPCLNKVYLSQIGVNTAAFPAFNALDDDACVPLAKVIPDASVKFEARQLRLEISVPQIAVKNDAR GYVPPERWDRGINALLLGYSFSGANGVQSSNENGGDNDYFLNLNSGLNLAGWRLRNNSTWSYGQDEPGLWQNISSYAQYA IIPIKGELTVGDSYTGGDFFDSVGFRGVQLASDDNMLPDSLRGFAPTVRGIAKSNAQVTIKQNGYTVYQTYVPPGAFEIN DLFSSASSGDLQVEIKESDGTLNRYTIPYSSVPLLQRQGRLKYALTAANYRSNSNDQDEKAFAQATLQWGGPWGVTWYGG GQFSDDYRAGMLGMGFNLGELGAVSVDGTWANSTLANNQDYQGQSWRFLYAKTLNAYGTNFQLMGYRYSTSGFYTLADTM YHRMEGYTQSDNDETPLWARYYNLYYSKRGKLQMNISQQLGDYGSFYLSGSEQTYWNTDDQDRLLQFGYNTQIKDVTLGL SWNYSQSRGQPSADQVFALNVSLPLGQWLSSSSGDINSRGHSAWMTSNTSADNDGNVTQNVGVSGSLLEDDKLSYSVQQG YVSQGESASGNASLDYKGAWGESKVGYNYSDNGNQQQVNYGLSGSVIVHSEGITLGQSLGETNVLVSAPGAENTKVANYT GISTDGEGNSLLPYATPYRENRIALDTASLKQNVDIENAVVNVVPTKGALVRARFSAHVGARVLFSPLMNGKPLRFGAMA TLDDADKISGIVDDDGSLYMSGLPEKGTITVRWGEAREQQCQLKFTLTVQQMAAPITRRNAVCE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 49 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D782_2874 | YP_007341012.1 | P pilus assembly protein, porin PapC | VFG0876 | Protein | 0.0 | 50 |
| D782_2874 | YP_007341012.1 | P pilus assembly protein, porin PapC | VFG0446 | Protein | 2e-178 | 48 |
| D782_2874 | YP_007341012.1 | P pilus assembly protein, porin PapC | VFG0454 | Protein | 5e-166 | 46 |
| D782_2874 | YP_007341012.1 | P pilus assembly protein, porin PapC | VFG1645 | Protein | 0.0 | 46 |
| D782_2874 | YP_007341012.1 | P pilus assembly protein, porin PapC | VFG0912 | Protein | 7e-180 | 46 |
