Gene Information

Name : D782_2731 (D782_2731)
Accession : YP_007340872.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : arginine/lysine/ornithine decarboxylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2793233 - 2795377 bp
Length : 2145 bp
Strand : -
Note : PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal domain

DNA sequence :
ATGAAAATAATCGCAATTATGAACCACTTTGGTGTGCTGGCAAAAGAAGCACCTATTGAAGAATTGCATAAAAAGTTATT
GGCAGAGAACTATCGTATTATTTATCCAGAAGATGTTGATGACCTCATGGAGCTGGTTGACAATAATGCAAAAGTTTGTG
GCGTTGTTTTTGACTGGGATACATGGTCAGTTCTCTTACCGAAAAACATTTCAGGGCTAAATGAGCAACTGCCGATGTAT
GCATTTTCGAGTCAGCGTACGCAGCTCGACATCGATGTGGATGATCTTGGCCTTAATCTTCATTTCTTCGAGTATGCTTT
TGATGCAGTTGATGAAATTGCGGCACGTATTCAGCGCGGAACTGACGCCTATTTTGACGCGATTCTCCCGCCTTTTACTA
AAGCGCTCTTTCGCTATGTTGACGAAGGGAAATATACGTTTTGCACGCCAGGTCATATGGGCGGTACGGCTTTCCAGCAG
AGCCCGGTAGGTAGCCTGTTTTACGACTTCTTTGGTGCAAATACCATGAAGTCAGATATCTCGGTCTCCGTCTCTGAACT
CGGTTCACTGCTTGACCACTCAGGCCCACACCGCGAGGCAGAGAATTATATCGCCGATGCCTTTAACGCAGACCGCAGCT
ACATGGTGACAAACGGCACATCAACGGCCAATAAAATTGTGGGGATGTACGCCGCACCTGCGGGCAGCACCATTTTAGTC
GACCGTAATTGCCACAAGTCGCTGACTCATTTAATGATTATGAGCGATGTCACACCAATCTATTTCCGTCCAACGCGAAA
TGCGTGGGGGATCTTAGGTGGAATTCCTCGCAGTGAGTTTGCGCGAGAAACGATCGAAGCGCGTGTAAAACAGACCCCTG
GCGCCAGCTGGCCGGTGCATGCAGTAATCACAAACTCCACCTATGACGGTCTGCTCTATAACACCGACTACATCAAACAG
ACGCTGGAAGTAAAATCCATTCACTTTGATTCAGCCTGGGTGCCTTATACCAACTTTAGCCCAATCTACAAAGGGCTCTG
CGGAATGAGCGGTACGCGCGTGCCGGGGAAAGTGATATATGAAACGCAGTCTACGCATAAATTACTGGCCGCTTTTTCAC
AGGCATCAATGATTCACATTAAAGGCGAATTTGAAGAAGAGACCTTTAACGAAGCCTTTATGATGCATACGTCCACGTCG
CCTCATTATGGCATCGTTGCGTCTATTGAAACGTCTGCGGCAATGATGAAAGGGAATACGGGTAAACGTCTGATGGAGAA
TTCTATCCTGCGGGCCGTTCGCTTCCGTAAAGAGATTAAAAAGATTAAGGCGTCCTCAGAGAGCTGGTTCTTCGACGTCT
GGCAGCCAGAAGGAGAGTCATTAGCGCCTTGCTGCTGGAATCTTACGCCCGGTGCCGAGTGGCATGGATTTAAAAATATC
GATGAAGGGCATATGTTCCTTGATCCCATCAAAGTCACTCTGCTAACGCCGGGAATGGATAAACAGGGCAAAATGGAGGA
GCAGGGGATTCCGGCATCCATCGTGGCGAAGTATCTCGATCAACATGGCATTATTGTGGAGAAAACGGGCCCCTATAATC
TCTTATTTCTCTTCAGTATTGGAATCAATAAAACTAAGGCTCTGAGTCTGCTGCGGGCGTTGAATGATTTCAAACGTGAC
TACGATCGTAACGCGTTCGTCAAAGAGATGCTGCCATCCGTATATGAGCAGCAGCCTACTTTCTATGCGGGTATGCGAAT
TCAGGAACTTGCAAACGGCATTCATAAATTGATTCGTCAGCATAAGCTGCCGGAACTGATGTTCCGCGCTTTTGAAACCT
TACCGGCGATGGTGATGAACCCGCACGCGGCTTTCCAGAAAGAGCTTCACGGTGAAATTGAGGAGGTCTATGTCGACGAG
ATGATTGGCCGAGTCAGTGCGAACATGATCCTGCCTTATCCTCCAGGTGTGCCATTAGTGATGCCAGGAGAGATGCTGAC
CGAGGAGAATCGTCCGACACTCGAGTTTATTCAGATGCTCTGCGAAATTGGTGCCTGGTATCCGGGCTTTGAAACAGATA
TCCACGGCGCTTACCGGCAAGCAAATGGGCGCTATACGGTTAAAGTGATCAAGAACGTGCAGTAA

Protein sequence :
MKIIAIMNHFGVLAKEAPIEELHKKLLAENYRIIYPEDVDDLMELVDNNAKVCGVVFDWDTWSVLLPKNISGLNEQLPMY
AFSSQRTQLDIDVDDLGLNLHFFEYAFDAVDEIAARIQRGTDAYFDAILPPFTKALFRYVDEGKYTFCTPGHMGGTAFQQ
SPVGSLFYDFFGANTMKSDISVSVSELGSLLDHSGPHREAENYIADAFNADRSYMVTNGTSTANKIVGMYAAPAGSTILV
DRNCHKSLTHLMIMSDVTPIYFRPTRNAWGILGGIPRSEFARETIEARVKQTPGASWPVHAVITNSTYDGLLYNTDYIKQ
TLEVKSIHFDSAWVPYTNFSPIYKGLCGMSGTRVPGKVIYETQSTHKLLAAFSQASMIHIKGEFEEETFNEAFMMHTSTS
PHYGIVASIETSAAMMKGNTGKRLMENSILRAVRFRKEIKKIKASSESWFFDVWQPEGESLAPCCWNLTPGAEWHGFKNI
DEGHMFLDPIKVTLLTPGMDKQGKMEEQGIPASIVAKYLDQHGIIVEKTGPYNLLFLFSIGINKTKALSLLRALNDFKRD
YDRNAFVKEMLPSVYEQQPTFYAGMRIQELANGIHKLIRQHKLPELMFRAFETLPAMVMNPHAAFQKELHGEIEEVYVDE
MIGRVSANMILPYPPGVPLVMPGEMLTEENRPTLEFIQMLCEIGAWYPGFETDIHGAYRQANGRYTVKVIKNVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 75
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_2731 YP_007340872.1 arginine/lysine/ornithine decarboxylase VFG1670 Protein 0.0 65