Gene Information

Name : D782_2005 (D782_2005)
Accession : YP_007340176.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2093391 - 2094212 bp
Length : 822 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGCCACAACGGCAATCACCGCACGCCGAACAAGGCATTGTGCTGAAATCGTTATGCGCGGGCTATGGCAGCCAGCGTAT
CGTCAATGACATCAACCTTACGCTTCCTGCCGGGAAACTCACCGTTCTGATCGGCGCTAACGGGTCGGGAAAATCGACGC
TGTTATCGACCATCGCGCGGACATTAAAACCGCAGGGCGGAAGCGTACACCTGAACGGGCGCGACATTCATCAACAGCCC
ACTAAACAGGTCGCCCGACAGATGGGCATTTTGCCGCAGTCGCCGATCACGCCGGAAGGATTAACCGTTTTTGAACTGGT
CTCAAGGGGACGTTTTCCCTGGCAGGGGCTGATTCGCCAATGGTCTGATGATGATGAACGCGCGGTGACAGACGCACTGG
CTCTTACGGGCACCGCTGCTCTGGCGCACTTACCCGTTGAGAGTCTCTCTGGCGGGCAGCGTCAACGCTGCTGGATAGCG
ATGGCGCTGGCGCAGCAGACACCGACCATTCTGCTTGATGAACCGACAGCGTGGCTGGATCTGCGTTATCAGGTGGAGAT
CCTGCAACTTCTGCAACGCTTAACCCGCGATCATGGCCGCACCGTGGTCACCGTTCTGCACGACCTCAATTTCGCGGTCA
ATTACGCCGATACGCTGGTGCTGATGAAACAGGGACGGGTGGTTGAAGTGCTGGACGACCTGACCCGCTGTACGCCGGAG
CTGATCCGCCATGTGTTTGATGTGGACGTCGAGATGATGATAAACCCGCAGAATGGCAAACCGTGGTTTATGCCTTTTCG
CGCAGTGGCGGACCGCGCATGA

Protein sequence :
MPQRQSPHAEQGIVLKSLCAGYGSQRIVNDINLTLPAGKLTVLIGANGSGKSTLLSTIARTLKPQGGSVHLNGRDIHQQP
TKQVARQMGILPQSPITPEGLTVFELVSRGRFPWQGLIRQWSDDDERAVTDALALTGTAALAHLPVESLSGGQRQRCWIA
MALAQQTPTILLDEPTAWLDLRYQVEILQLLQRLTRDHGRTVVTVLHDLNFAVNYADTLVLMKQGRVVEVLDDLTRCTPE
LIRHVFDVDVEMMINPQNGKPWFMPFRAVADRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-46 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-46 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-46 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-46 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-45 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-44 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-45 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-45 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-45 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-45 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-45 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-45 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_2005 YP_007340176.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component BAC0164 Protein 4e-45 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_2005 YP_007340176.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG1042 Protein 3e-45 46
D782_2005 YP_007340176.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG0925 Protein 3e-46 45