Gene Information

Name : D782_1687 (D782_1687)
Accession : YP_007339871.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1764132 - 1764869 bp
Length : 738 bp
Strand : -
Note : PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP

DNA sequence : 
ATGCGCCGTATTTTCGCTGTCCTCATCCCTGCGCTGTTGTTGCTCTCACCCGCTGCCTTTGCGCAGCTGCCGGGGCTGGT
CAGCCAGCCATTACCGGGCGGCGGTCAAAGCTGGTCGCTGCCGGTTCAGACGCTGGTGTTTATCACCTCGCTGACGTTTA
TTCCGGCCATTTTGCTGATGATGACCAGTTTTACGCGCATCATTATCGTCTTCGGTCTGCTGCGCAACGCGCTGGGAACG
CCCTCTGCACCACCGAATCAGGTGCTGTTGGGGCTGGCGCTGTTTCTGACCTTTTTTATCATGTCGCCGGTCATCGATAA
GATTTACACCGACGCCTATCAGCCTTTTAGTGAAGACAAAATTTCGTTGCAGGAAGCGATGGATAAAGGTTCGCAGCCGC
TGCGCGAGTTTATGCTGCGTCAGACGCGCGAGGCCGATTTGGCGCTGTTTGCGCGTCTGGCGAACAGTGCGCCCATTGAA
GGTCCGGAAGCGGTGCCGCTGCGCATTCTGCTGCCTGCTTACGTGACCAGCGAGCTGAAAACCGCCTTCCAGATTGGCTT
CACCATTTTTATTCCCTTCCTGATTATCGACCTGGTGATCGCCAGCGTGTTAATGGCGCTGGGGATGATGATGGTGCCGC
CCGCCACGATCGCCCTGCCGTTTAAGCTGATGCTGTTCGTGCTTGTCGACGGCTGGCAACTGCTGGTCGGTTCGCTGGCG
CAAAGTTTTTACAGTTAA

Protein sequence : 
MRRIFAVLIPALLLLSPAAFAQLPGLVSQPLPGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGT
PSAPPNQVLLGLALFLTFFIMSPVIDKIYTDAYQPFSEDKISLQEAMDKGSQPLREFMLRQTREADLALFARLANSAPIE
GPEAVPLRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA
QSFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 5e-30 44
lscR AAO18040.1 LscR Virulence TTSS locus Protein 1e-30 42
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 1e-30 42
escR AAC31528.1 L0049 Virulence LEE Protein 1e-30 42
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 1e-30 42
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 1e-30 42
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 1e-30 42
escR AAK26700.1 EscR Virulence LEE Protein 9e-31 42
escR AAL57527.1 EscR Virulence LEE Protein 9e-31 42
escR CAC81847.1 EscR protein Virulence LEE II Protein 9e-31 42
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 5e-29 42
escR CAI43889.1 EscR protein Virulence LEE Protein 9e-31 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 5e-29 42
escR AAC38369.1 EscR Virulence LEE Protein 6e-30 42
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 1e-30 42
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 8e-22 41
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 8e-22 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 4e-26 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 4e-26 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 4e-26 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-22 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-22 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 1e-30 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 1e-30 41
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 4e-30 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 4e-30 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 8e-31 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-90 87
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG2494 Protein 1e-74 69
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG1259 Protein 4e-65 64
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG2016 Protein 4e-59 56
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG0188 Protein 7e-34 43
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG0394 Protein 3e-31 42
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG0827 Protein 6e-31 42
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG0715 Protein 4e-30 42
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG0519 Protein 5e-31 41
D782_1687 YP_007339871.1 flagellar biosynthetic protein FliP VFG0044 Protein 1e-33 41