Gene Information

Name : D782_1084 (D782_1084)
Accession : YP_007339297.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1109108 - 1111681 bp
Length : 2574 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGCGTCTGGATCGTCTTACTAACAAATTCCAGCTTGCTCTCGCCGATGCCCAGTCTCTCGCACTGGGGCACGACAACCA
GTTTATCGAACCACTTCATTTAATGAGCGCCTTACTGAATCAGGAAGGGGGTTCGATTCGTCCTTTGTTAACCACTGCCG
GCATTAATGCGGGCCAGCTTCGCACGGCTATCGATCAGGCGTTAAGCCGATTACCGCAGGTGGAAGGTACCGGCGGCGAC
GTCCAGCCTTCACAGGATCTGGTGCGTGTGCTGAATCTTTGCGACAAGCTGGCGCAAAAACAGGGCGACAACTTTATTTC
GTCAGAACTGTTTGTTCTGGCCGCGCTTGAGTCTCGCGGTTCACTGGCCGACCTGCTGAAATCCGCAGGGGCGACGACTG
CCAACATTACTCAGGCGATTCAACAGATGCGCGGAGGGGAGAGCGTGAACGATCAAAATGCCGAAGACCAACGTCAGGCA
TTGAAAAAATATACCGTCGACCTGACCGAGCGTGCCGAGCAGGGCAAGCTTGATCCGGTCATCGGTCGTGATGAAGAAAT
TCGCCGCACCATTCAGGTGCTGCAACGTCGTACTAAAAATAACCCGGTGCTGATTGGTGAACCTGGCGTCGGTAAAACTG
CCATCGTTGAAGGGCTGGCGCAGCGTATCGTGAACGGCGAAGTGCCGGAAGGGCTGAAGGGCCGCCGCGTACTGGCGCTG
GATATGGGTGCGCTGGTGGCCGGGGCGAAATATCGCGGCGAGTTTGAAGAACGTCTCAAAGGCGTGCTGAACGATCTGTC
GAAACAGGAAGGCAACGTCATTCTGTTTATCGATGAGCTGCACACCATGGTGGGTGCAGGTAAAGCCGATGGCGCAATGG
ACGCCGGGAACATGCTGAAACCGGCGCTGGCCCGTGGTGAGCTGCACTGCGTGGGTGCCACGACGCTGGATGAATACCGT
CAGTACATTGAAAAAGATGCGGCGCTTGAACGTCGTTTCCAGAAAGTGTTTGTAGCAGAACCGTCCGTTGAAGATACCAT
CGCGATCCTGCGTGGTCTGAAAGAACGTTATGAGCTGCACCACCATGTGCAGATCACCGACCCGGCTATCGTCGCAGCGG
CAACGTTATCGCATCGTTATATTGCTGACCGTCAGCTACCGGATAAAGCGATTGACCTGATTGATGAAGCGGCGTCCAGC
ATTCGTATGCAGATTGACTCGAAGCCGGAAGAACTCGACCGCCTCGATCGCCGTATCATCCAGTTGAAACTGGAACAGCA
GGCGCTGAAGAAAGAGTCTGACGAAGCGAGCCTGAAACGTCTCGATATGCTGAATGAAGAGCTGGAAGACAAAGAACGCC
AGTATTCGGTATTAGAAGAAGAGTGGAAGGCGGAGAAAGCCTCACTTTCCGGTACGCAGACGATTAAAGCAGAGCTCGAA
CAGGCGAAAATCGCCATCGAGCAGGCGCGCCGCGTGGGTGACCTGGGGCGGATGTCTGAACTGCAGTACGGTAAAATTCC
GGAACTGGAAAAACAACTTGCTGCCGCGACTCAGTCTGAAGGCAAAACCATGCGCCTGCTGCGTAACCGTGTAACGGATG
CGGAAATCGCCGAAGTGCTGGCACGCTGGACCGGGATCCCGGTTGCGCGCATGCTGGAAGGCGAACGTGAAAAACTGCTG
CGAATGGAGCAAGATCTGCATAGCCGGGTGATTGGTCAGAACGAAGCGGTGGAAGCGGTATCGAACGCGATTCGTCGTAG
CCGCGCCGGGCTCTCCGATCCTAACCGCCCAATTGGTTCGTTCCTGTTTCTGGGGCCGACCGGTGTCGGTAAAACGGAGC
TGTGTAAAGCGCTGGCGAACTTTATGTTCGATAGCGACGACGCGATGGTGCGTATCGATATGTCCGAATTTATGGAGAAA
CACTCCGTGTCTCGCCTGGTCGGTGCGCCTCCGGGATATGTCGGTTATGAAGAAGGCGGCTATCTAACCGAAGCCGTTCG
TCGTCGCCCTTACTCGGTCATCCTGCTGGATGAAGTTGAGAAAGCGCACCCGGATGTGTTCAACATTCTGCTGCAGGTGC
TGGATGATGGCCGTCTGACTGACGGGCAGGGGAGAACGGTCGACTTCCGTAATACGGTGGTGATTATGACCTCTAACCTG
GGTTCCGACCTGATTCAGGAACGCTTTGGCGAGCTGGATTACGGTCACATGAAAGATCTGGTGCTGGGCGTGGTCAGTCA
GAGCTTCCGTCCGGAATTCATCAACCGTATTGATGAAGTGGTTGTGTTCCATCCGCTGGGTGAAGCACACATTGCTTCCA
TTGCACAGATTCAGCTGCAACGTCTGTACAAACGTCTGGAAGAGCGCGGTTATGAAACGCAGATTTCCGATGAGGCGCTG
CATCTGTTGAGTAAAAACGGTTATGACCCGGTATATGGCGCGCGTCCGTTGAAACGCGCTATTCAGCAGCAAATTGAAAA
CCCGCTGGCGCAGCAAATCCTTTCCGGTGAGCTGGTTCCGGGGAAAACGATACGTCTGGAAGTTAAAGACGATCATATTG
TGGCAGTGCAGTAA

Protein sequence :
MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTTAGINAGQLRTAIDQALSRLPQVEGTGGD
VQPSQDLVRVLNLCDKLAQKQGDNFISSELFVLAALESRGSLADLLKSAGATTANITQAIQQMRGGESVNDQNAEDQRQA
LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLAL
DMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS
IRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELEDKERQYSVLEEEWKAEKASLSGTQTIKAELE
QAKIAIEQARRVGDLGRMSELQYGKIPELEKQLAAATQSEGKTMRLLRNRVTDAEIAEVLARWTGIPVARMLEGEREKLL
RMEQDLHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQERFGELDYGHMKDLVLGVVSQSFRPEFINRIDEVVVFHPLGEAHIASIAQIQLQRLYKRLEERGYETQISDEAL
HLLSKNGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKTIRLEVKDDHIVAVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-101 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_1084 YP_007339297.1 ATP-dependent chaperone ClpB VFG0079 Protein 2e-126 42
D782_1084 YP_007339297.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-106 42