Gene Information

Name : RTCIAT899_PC03905 (RTCIAT899_PC03905)
Accession : YP_007337126.1
Strain :
Genome accession: NC_020062
Putative virulence/resistance : Virulence
Product : gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 836735 - 838213 bp
Length : 1479 bp
Strand : +
Note : -

DNA sequence :
ATGCAGGAAAAGATCGACCAGCTCCGGACTTTATCCGTTTCGCCGCAGGCATTGTTCATCGCAGGCGCCTGGCGCCAGCC
GATCAGCGGCGCTGCGATGGACGTCACTTCGCCGATCGACGGAACAAAGCTGACCACCATTGCCGATGCCGGCACTGATG
ATGTCGATCTGGCCGTCAAGGCTGCACGCCATTCCTTCGAAAAGGGCAGTTGGTCGAAGGCGGCGCCGGCCGAACGCAAG
AAGGTGTTGCTGAAAATTGCCGAACTGATCGAGAAGAACGCGCTTGAACTCGCCGTACTCGGCGTGCGTGACAACGGCAC
GGAAATTTCGATGGCGCTAAAGGCCGAGCCCGGCAGCGCCGCCGGCACGTTCCGTTACTATGCCGAGGCGGTCGACAAGG
TCTATGGCCAGATCGCGCCGACGGCTCAGAATATTCTCGGTCTCGTCCATCGCGAGGCCATCGGCGTCGTTGCCGCTATC
GTGCCGTGGAATTTCCCGATGATGATCGGCGCCTGGAAGATCGCGCCGGCGCTTGCTGCCGGCAATTCCGTCGTGCTGAA
GCCCGCCGAGGGCGCGTCGCTGACGCTGCTGAAGCTTGCCGAAATTTGCGCCGAGGCCGGATTGCCCGAAGGCGTGCTCA
ACGTCGTGACCGGGCGCGGTGCGGTCTGCGGCGAGGCACTGGGGCTGCACATGGATATCGATGTCCTCGCCTTCACCGGT
TCCGGCCCCGTCGGACGGCGGCTCCTGGAATATTCGGCGCGCTCGAATCTGAAGCGTGTCTACCTGGAGCTTGGCGGCAA
GTCGCCGAACATCGTCTTTGCCGATGCGCCCGATCTCGATCAGGCGGCCAAGGTTTCCGCCTATGGCATTTTTCGCAATT
CCGGCCAGGTCTGTGTCGCCGGTTCCCGGCTGCTTGTGGAGAAGTCGATTCATAAGGCCTTCTCCGAGAAAGTGACCGGC
ATTGCCGAAAGCATGAAAGTTGGCGATCCCCTGCAGCTTTCGACGGAAGCCGGAGCTATCTCCAGCGAGGTCCAGCTGAG
AAAAGACCTTGGCTATGTCTCGCAGGCGGTATCGGAGGGTGCATCGCTGCGCACCGGTGGTTCGCGTATTCTTGAGGAGA
CGGGCGGCTATTACATGCGGCCGACCGTATTCGATGCGACGCCGTCGATGACGCTGGCGCGGGAAGAGGTCTTCGGCCCG
ATCCTGTCGATCATCCCCTTCGAAACGGAGGCCGAGGCACTTGAGATCGCCAATGCCACTGAATACGGCCTTGCCTCGGC
CGTCTGGACGTCGAACATGTCGTGCGCCCATCGGATGGTGCGGGGCATCCGCGCCGGCGTGGTGCATGTCAACACCTATG
GCGGCAGCGATAACAGCGTGCCGCTCGGCGGCGTCAAGCAATCCGGCAATGGTCATGACAAGTCGCTGCATGCGCTCGAC
AAATATGTCGATCTGAAGACGGCTTGGATTCAGCTCTGA

Protein sequence :
MQEKIDQLRTLSVSPQALFIAGAWRQPISGAAMDVTSPIDGTKLTTIADAGTDDVDLAVKAARHSFEKGSWSKAAPAERK
KVLLKIAELIEKNALELAVLGVRDNGTEISMALKAEPGSAAGTFRYYAEAVDKVYGQIAPTAQNILGLVHREAIGVVAAI
VPWNFPMMIGAWKIAPALAAGNSVVLKPAEGASLTLLKLAEICAEAGLPEGVLNVVTGRGAVCGEALGLHMDIDVLAFTG
SGPVGRRLLEYSARSNLKRVYLELGGKSPNIVFADAPDLDQAAKVSAYGIFRNSGQVCVAGSRLLVEKSIHKAFSEKVTG
IAESMKVGDPLQLSTEAGAISSEVQLRKDLGYVSQAVSEGASLRTGGSRILEETGGYYMRPTVFDATPSMTLAREEVFGP
ILSIIPFETEAEALEIANATEYGLASAVWTSNMSCAHRMVRGIRAGVVHVNTYGGSDNSVPLGGVKQSGNGHDKSLHALD
KYVDLKTAWIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-107 52
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-74 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-77 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-77 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-77 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PC03905 YP_007337126.1 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase VFG0082 Protein 1e-74 41