Gene Information

Name : RTCIAT899_PC03335 (RTCIAT899_PC03335)
Accession : YP_007337013.1
Strain :
Genome accession: NC_020062
Putative virulence/resistance : Unknown
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 715831 - 717570 bp
Length : 1740 bp
Strand : +
Note : -

DNA sequence :
ATGACACCGCTTCTTTCCGTCTCTGATCTCTGCGTCGGCTTCGGACGCAACCCCGAGACCAAGCCCATTGTTCGCGGTGT
CAGCTTCGATCTCGATGCCGGCGAGACGCTGGCGATCGTCGGCGAGAGTGGTTCCGGCAAGTCGGTAACAGCATTGTCAA
TCAATCGCCTCGTCGATTTCGGCGGTGGCCGGATCACCGGCGGCTCGATCCGGCTCAAGCGTGCCGACAACAGCATCCTC
GATCTCACCAAGGCGAGCGAAGCAGAACTGACGAAGATCCGTGGTGCCGAGATCGGCATGATCTTTCAGGAGCCGATGAC
CTCGCTCAACCCGGTTCTAACGATTGGGACGCAGATCGAGGAATCCTTCCGGCTGCATCGCGGCCTGACCGGCGGCCAGG
CAAAGGCGGCGGCCAAGGACGCGCTGGATCGCGTGCGCATTCCAGATGCCGAGCGGCGACTTACCTATTGCCCGAACCAG
CTTTCCGGCGGCATGCTGCAGCGTGTGATGATCGCAACGGCGCTTGCCTGCAATCCGCGTCTATTGATTGCCGATGAGCC
GACGACGGCGCTCGATGTCACTGTGCAGGCGCAGATCATGGCGCTGCTTGCCGAATTGAAGCACGAGACCGGCATGTCGA
TGATCTTCATCACCCACGATATCGGGCTTGTCGCCGGCATCGCCGACAAGGTGATGGTGATGCAGGCCGGCGAGGCGGTG
GAGCAGGGCGAACTCGATCAGGTTCTCGATCATCCCGCGCATCCCTATACCCGGCATCTGCTGCATTCGGTCCCGCATTT
TTCATCGGGGCAGGCGGCACGCACCGATTTTCAACGCGATGAGCCAGCACTAAAATCGGTTTTGAAGGTGGATGGCTTGA
CGGTTCGCTTTCCGGTCAAGGGGAGTTTCCTGCGTCGATCGACCGATGCGGTTCACGCCGTCGAAGGCGTCGGTTTCGAC
CTGATGCCCGGCGAGACGCTGGCGATCGTCGGCGAAAGCGGCTCGGGCAAATCCACCACCGCCCGGGCGATCCTCGGATT
GGTGAAGTCGATCCGCGGCACGTTTACGACCAATGGCGGCAAAGCCGCCGATCGCACCAGCGCGGTGCAGATGGTCTTCC
AGAACCCCTATGCCTCGCTCAATCCGAGACTCCGCATCGATAGCATCCTTGCCGAACCGGTGATTGCATCGGGTGCGCGC
GTTTCGGCCGAGATGCGCGAACGCATGCTAATGCTGCTGAAGCGCGTGGGATTGCCGGAAAATGCTCTGGAGCGCTATCC
GCACGAATTTTCCGGCGGCCAGCGTCAGCGGCTTTGCATCGCGCGCGCATTGATGCTCAATCCGTCCGTGCTGGTGCTGG
ACGAAGCGGTGTCCGCGCTCGACGTCTCCGTTCAGGCGCAGGTCCTGGAATTGCTGATCGAACTGCAGCGCGAATATGGG
CTCGCCTATCTCTTCATCTCGCATGACATGGCGGTCGTGGAGCGGATCGCCCATCGCATCGCGGTGATCTATGCCGGGCA
GATCGTCGAGATCGGCGATGCCGCCTCGGTCTTGTCGGAGCCCAAGCATTCCTATACCAGGCGGCTGATCGCGGCGGTTC
CGACGGTTGCGCGGCGCAAGGAAAACTTTACGCTCGATACCCGCCAGGTTCCGTCCCTGGTGCGTCCTTTGGGCTTCGAG
CCCGCCCTTCCTGAGTGGCGCCGCTTTGCGCCGGATCACATCGCGCTGGCGGAAGCTTGA

Protein sequence :
MTPLLSVSDLCVGFGRNPETKPIVRGVSFDLDAGETLAIVGESGSGKSVTALSINRLVDFGGGRITGGSIRLKRADNSIL
DLTKASEAELTKIRGAEIGMIFQEPMTSLNPVLTIGTQIEESFRLHRGLTGGQAKAAAKDALDRVRIPDAERRLTYCPNQ
LSGGMLQRVMIATALACNPRLLIADEPTTALDVTVQAQIMALLAELKHETGMSMIFITHDIGLVAGIADKVMVMQAGEAV
EQGELDQVLDHPAHPYTRHLLHSVPHFSSGQAARTDFQRDEPALKSVLKVDGLTVRFPVKGSFLRRSTDAVHAVEGVGFD
LMPGETLAIVGESGSGKSTTARAILGLVKSIRGTFTTNGGKAADRTSAVQMVFQNPYASLNPRLRIDSILAEPVIASGAR
VSAEMRERMLMLLKRVGLPENALERYPHEFSGGQRQRLCIARALMLNPSVLVLDEAVSALDVSVQAQVLELLIELQREYG
LAYLFISHDMAVVERIAHRIAVIYAGQIVEIGDAASVLSEPKHSYTRRLIAAVPTVARRKENFTLDTRQVPSLVRPLGFE
PALPEWRRFAPDHIALAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 9e-97 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-78 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-78 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-78 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-78 41