|
Name : RTCIAT899_PC03335 (RTCIAT899_PC03335) Accession : YP_007337013.1 Strain : Genome accession: NC_020062 Putative virulence/resistance : Unknown Product : ABC transporter, ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 715831 - 717570 bp Length : 1740 bp Strand : + Note : - DNA sequence : ATGACACCGCTTCTTTCCGTCTCTGATCTCTGCGTCGGCTTCGGACGCAACCCCGAGACCAAGCCCATTGTTCGCGGTGT CAGCTTCGATCTCGATGCCGGCGAGACGCTGGCGATCGTCGGCGAGAGTGGTTCCGGCAAGTCGGTAACAGCATTGTCAA TCAATCGCCTCGTCGATTTCGGCGGTGGCCGGATCACCGGCGGCTCGATCCGGCTCAAGCGTGCCGACAACAGCATCCTC GATCTCACCAAGGCGAGCGAAGCAGAACTGACGAAGATCCGTGGTGCCGAGATCGGCATGATCTTTCAGGAGCCGATGAC CTCGCTCAACCCGGTTCTAACGATTGGGACGCAGATCGAGGAATCCTTCCGGCTGCATCGCGGCCTGACCGGCGGCCAGG CAAAGGCGGCGGCCAAGGACGCGCTGGATCGCGTGCGCATTCCAGATGCCGAGCGGCGACTTACCTATTGCCCGAACCAG CTTTCCGGCGGCATGCTGCAGCGTGTGATGATCGCAACGGCGCTTGCCTGCAATCCGCGTCTATTGATTGCCGATGAGCC GACGACGGCGCTCGATGTCACTGTGCAGGCGCAGATCATGGCGCTGCTTGCCGAATTGAAGCACGAGACCGGCATGTCGA TGATCTTCATCACCCACGATATCGGGCTTGTCGCCGGCATCGCCGACAAGGTGATGGTGATGCAGGCCGGCGAGGCGGTG GAGCAGGGCGAACTCGATCAGGTTCTCGATCATCCCGCGCATCCCTATACCCGGCATCTGCTGCATTCGGTCCCGCATTT TTCATCGGGGCAGGCGGCACGCACCGATTTTCAACGCGATGAGCCAGCACTAAAATCGGTTTTGAAGGTGGATGGCTTGA CGGTTCGCTTTCCGGTCAAGGGGAGTTTCCTGCGTCGATCGACCGATGCGGTTCACGCCGTCGAAGGCGTCGGTTTCGAC CTGATGCCCGGCGAGACGCTGGCGATCGTCGGCGAAAGCGGCTCGGGCAAATCCACCACCGCCCGGGCGATCCTCGGATT GGTGAAGTCGATCCGCGGCACGTTTACGACCAATGGCGGCAAAGCCGCCGATCGCACCAGCGCGGTGCAGATGGTCTTCC AGAACCCCTATGCCTCGCTCAATCCGAGACTCCGCATCGATAGCATCCTTGCCGAACCGGTGATTGCATCGGGTGCGCGC GTTTCGGCCGAGATGCGCGAACGCATGCTAATGCTGCTGAAGCGCGTGGGATTGCCGGAAAATGCTCTGGAGCGCTATCC GCACGAATTTTCCGGCGGCCAGCGTCAGCGGCTTTGCATCGCGCGCGCATTGATGCTCAATCCGTCCGTGCTGGTGCTGG ACGAAGCGGTGTCCGCGCTCGACGTCTCCGTTCAGGCGCAGGTCCTGGAATTGCTGATCGAACTGCAGCGCGAATATGGG CTCGCCTATCTCTTCATCTCGCATGACATGGCGGTCGTGGAGCGGATCGCCCATCGCATCGCGGTGATCTATGCCGGGCA GATCGTCGAGATCGGCGATGCCGCCTCGGTCTTGTCGGAGCCCAAGCATTCCTATACCAGGCGGCTGATCGCGGCGGTTC CGACGGTTGCGCGGCGCAAGGAAAACTTTACGCTCGATACCCGCCAGGTTCCGTCCCTGGTGCGTCCTTTGGGCTTCGAG CCCGCCCTTCCTGAGTGGCGCCGCTTTGCGCCGGATCACATCGCGCTGGCGGAAGCTTGA Protein sequence : MTPLLSVSDLCVGFGRNPETKPIVRGVSFDLDAGETLAIVGESGSGKSVTALSINRLVDFGGGRITGGSIRLKRADNSIL DLTKASEAELTKIRGAEIGMIFQEPMTSLNPVLTIGTQIEESFRLHRGLTGGQAKAAAKDALDRVRIPDAERRLTYCPNQ LSGGMLQRVMIATALACNPRLLIADEPTTALDVTVQAQIMALLAELKHETGMSMIFITHDIGLVAGIADKVMVMQAGEAV EQGELDQVLDHPAHPYTRHLLHSVPHFSSGQAARTDFQRDEPALKSVLKVDGLTVRFPVKGSFLRRSTDAVHAVEGVGFD LMPGETLAIVGESGSGKSTTARAILGLVKSIRGTFTTNGGKAADRTSAVQMVFQNPYASLNPRLRIDSILAEPVIASGAR VSAEMRERMLMLLKRVGLPENALERYPHEFSGGQRQRLCIARALMLNPSVLVLDEAVSALDVSVQAQVLELLIELQREYG LAYLFISHDMAVVERIAHRIAVIYAGQIVEIGDAASVLSEPKHSYTRRLIAAVPTVARRKENFTLDTRQVPSLVRPLGFE PALPEWRRFAPDHIALAEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 9e-97 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-78 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-78 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-78 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-78 | 41 |
