Gene Information

Name : RTCIAT899_PC00025 (RTCIAT899_PC00025)
Accession : YP_007336365.1
Strain :
Genome accession: NC_020062
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein TctD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4955 - 5629 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGCGGGTGCTTCTGGTCGAGGACGAAAAACCAATGGCTGCCGTCTTGCGCAATGGACTTGTGCGCCAAGGTATGGTCGT
GGACGATGTGGCGACCCTCGTGGATGCCGACGCTGCTCTTTACGACAACGTCTACGACGCAGTGGTGCTGGATCGCAGAT
TGCCTGACGGCGACGGCCTGTCGCTGGTCAAATCACTGCGCGCCAGAGGCGATACCGTACCCGTGCTTGTATTGACCGCG
AAGGGGGACCTGCTTGACCGGATCGCCGGCCTCGATAGCGGCGCGGACGACTATCTTGGCAAACCCTTTTCTTTTGAAGA
GCTCCTGGCCCGGCTGCGCGCGCTCCTGCGCCGCCCTGCCAATCTGCAGCCTGATATCGTTAGGTTGGGCCGCTTGTCAT
TCGATTTCGGGCATCGTGAGGCACATGTCGAAGCCGTCCCTCTGCGCATGCCGCGCCGGGAACTGCTTGTGCTCGAAGCG
CTGATGAGGCGGATGGGGCGGATGGTACTGCGCGAGATGTTGATGGAAGCAGTCTTCGGCATGAACGACGAGATCGAATC
GAATGCACTCGATACACATATCTCCCGCCTGCGCCGTAAGCTCACCGACGCCCATGCGGACGTTGCAATTAACGGCATCC
GCGGTGTCGGCTATCTGATCAGCGAGACGGCGTGA

Protein sequence : 
MRVLLVEDEKPMAAVLRNGLVRQGMVVDDVATLVDADAALYDNVYDAVVLDRRLPDGDGLSLVKSLRARGDTVPVLVLTA
KGDLLDRIAGLDSGADDYLGKPFSFEELLARLRALLRRPANLQPDIVRLGRLSFDFGHREAHVEAVPLRMPRRELLVLEA
LMRRMGRMVLREMLMEAVFGMNDEIESNALDTHISRLRRKLTDAHADVAINGIRGVGYLISETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PC00025 YP_007336365.1 transcriptional regulatory protein TctD NC_002516.2.879194.p Protein 6e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PC00025 YP_007336365.1 transcriptional regulatory protein TctD VFG0473 Protein 4e-23 42