Gene Information

Name : RTCIAT899_PC01170 (RTCIAT899_PC01170)
Accession : YP_007336585.1
Strain :
Genome accession: NC_020062
Putative virulence/resistance : Virulence
Product : siderophore ABC transporter, permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 249189 - 250235 bp
Length : 1047 bp
Strand : +
Note : -

DNA sequence :
ATGGGCCACGGTAATGCGGTCGGCCGCTATCGCCTGGCAAACCTCAGAAAACATCTTGTGCTTTGTCTGCTGCTTGCAGG
CGTAGTCTTTGCGTTTCTCGCCGATATTGCCACCGGTCCAGCCTGGTACGGACTGGACGATGTGTTGAAGACCACGCTGA
TGCCCGCGGATGCGCAGCCCCAGATGCGTGTTGTGATCTGGTCCATTCGGATGCCGTCAGCCCTCATGGCTATTGTCGTC
GGAATGGCGTTGGCGACCGCCGGCGTTCAGATGCAGACGGTCCTTAACAACCCGCTCGCGAGCCCGTTCACTCTTGGAAT
TTCGTCTGCAGCAAGCTTCGGTGCGGCGCTCGCTCTCGCTTTCGGCCTGTCCTTCATTCCAGTCGCCGGCGAATATATCG
TTGCGGTCAATGCTTTTATCATGGCACTTGGATCTGCCCTCATCATCCATTCAGTGGGATTGCGGCGGGGAAGCTCTGTC
CAGACGATCGTGTTGCTCGGCATCGCGCTGGTGTTCAGCTTCAATACCGCATTGGCGATGGTTCAGTATTTTGCAAACGA
TCAGGCTGTTGCCTCCATCGTGTTCTGGACGATGGGCAGCTTGACCAAGGCAACCTGGCCGAAGCTTGCCGTGACAATCG
CCGTCCTGGTTCTCACCATTCCCATCTTCGTCTATCGACGCTGGCAGTTGACGGCACTTCGGCTCGGAGAGGCTCGCGCG
GCATCCTTTGGAGTCCCGGTTCGTCGCCTTCGACTGGAAACGCTCGTGCTCATATCGCTCCTGTCATCCATCCCGGTCGC
ATTTGTCGGAACGATCGGGTTTGTCGGACTTGTGGCGCCACACATTGCGAGGATGCTTGTCGGTGAGGATCAGCGGCACC
TGCTTCCTGCCAGCGCCATGATCGGAGCCTTGATCATGTCTTCCAGTTCCACGATGGCGAAAGTTCTCGTGCCGGGCGCG
GTTTTACCGATCGGCGTCATAACCGCCGTCATAGGCCTGCCGATCTTCTTTTATCTTATCCTGAAGGGAGGGCGGGAAAC
GTGGTAG

Protein sequence :
MGHGNAVGRYRLANLRKHLVLCLLLAGVVFAFLADIATGPAWYGLDDVLKTTLMPADAQPQMRVVIWSIRMPSALMAIVV
GMALATAGVQMQTVLNNPLASPFTLGISSAASFGAALALAFGLSFIPVAGEYIVAVNAFIMALGSALIIHSVGLRRGSSV
QTIVLLGIALVFSFNTALAMVQYFANDQAVASIVFWTMGSLTKATWPKLAVTIAVLVLTIPIFVYRRWQLTALRLGEARA
ASFGVPVRRLRLETLVLISLLSSIPVAFVGTIGFVGLVAPHIARMLVGEDQRHLLPASAMIGALIMSSSSTMAKVLVPGA
VLPIGVITAVIGLPIFFYLILKGGRETW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67369.1 putative permease Not tested PAI II CFT073 Protein 2e-51 51
irp6B YP_005124376.1 membrane protein permease Irp6B Virulence Not named Protein 8e-50 46
irp6B NP_938505.1 membrane protein permease Irp6B Not tested Not named Protein 2e-51 46