Gene Information

Name : RTCIAT899_PC01015 (RTCIAT899_PC01015)
Accession : YP_007336555.1
Strain :
Genome accession: NC_020062
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 220406 - 221071 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGCGGATACTTGTAGCTGAAGATGATCGCCGCATCGCCGATTCGCTTGGTACGGCCCTGTCGAGTGCCGGCTTCGCCGC
TGAATATGCCAGGGACGGAGAAGATGCCTGGTTCCGTGGAGACACTGAAGCATTCGATGCGGTGATCCTCGATCTCGGTC
TTCCGACCCTGGATGGTTTGACGATCCTGAAGCGCTGGCGTCGAGCGGGGCGTAACGTTCCCGTATTGATTCTGACCGCG
CGTGGGCAGTGGAACGAGCGAGTGGAAGGAATTGAGTCGGGTGCCGACGACTACGTGGTCAAACCTTTCCGCATGGAAGA
AGTCGTAGCGCGTGTCCGCGCGATAGTCCGCCGGGCGGCGGGCTTTGCATCGTCGCAAATTGAAATTGGCGAGCTTGTTC
TCGACACGCGAATGAGACAAGTGTCACGCGCGGGCATTCCGATCTCGCTTACACCACAGGAATACCGGCTGCTGGCCTTT
ATGGCGCATCAGGGCGGCCGCGTCGTCTCGCAGCTTGAGATAGCCGAACATCTTTATACCGAGAACTTCGAAGGCGGGTC
GAATGCCGTCGAAGTGCTCATCGGCCGCCTAAGGAAACGCTTGGGCGCCGATATCATCGCGACGCGACGCGGCTTTGGGT
ACATTCTCGGTGGGACTGATCGTTGA

Protein sequence : 
MRILVAEDDRRIADSLGTALSSAGFAAEYARDGEDAWFRGDTEAFDAVILDLGLPTLDGLTILKRWRRAGRNVPVLILTA
RGQWNERVEGIESGADDYVVKPFRMEEVVARVRAIVRRAAGFASSQIEIGELVLDTRMRQVSRAGIPISLTPQEYRLLAF
MAHQGGRVVSQLEIAEHLYTENFEGGSNAVEVLIGRLRKRLGADIIATRRGFGYILGGTDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PC01015 YP_007336555.1 transcriptional regulatory protein QseB NC_002516.2.879194.p Protein 2e-29 42
RTCIAT899_PC01015 YP_007336555.1 transcriptional regulatory protein QseB BAC0197 Protein 2e-21 42
RTCIAT899_PC01015 YP_007336555.1 transcriptional regulatory protein QseB BAC0487 Protein 3e-21 41
RTCIAT899_PC01015 YP_007336555.1 transcriptional regulatory protein QseB BAC0083 Protein 6e-23 41
RTCIAT899_PC01015 YP_007336555.1 transcriptional regulatory protein QseB CP001138.1.gene1939. Protein 8e-24 41
RTCIAT899_PC01015 YP_007336555.1 transcriptional regulatory protein QseB BAC0638 Protein 4e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PC01015 YP_007336555.1 transcriptional regulatory protein QseB VFG0475 Protein 8e-24 41