Gene Information

Name : RTCIAT899_PC05660 (RTCIAT899_PC05660)
Accession : YP_007337473.1
Strain :
Genome accession: NC_020062
Putative virulence/resistance : Virulence
Product : L-lysine 6-monooxygenase (Lysine 6-N-hydroxylase)(Lysine N(6)-hydroxylase) (Lysine-N-oxygenase)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1205721 - 1207040 bp
Length : 1320 bp
Strand : +
Note : -

DNA sequence :
ATGACATCGCACGTGCTCGACCTCGCCGGGGCCGGAATCGGTCCCTTCAACCTCAGCCTTGCCGCTCAGCTCGATTCGAT
ACCGCAACTTTCCGTCCGCTTCTTCGAGCGGCGTCCATCCTTCGCTTGGCATCCGGGAATGATGCTGCCGGGTGCGGAAA
TGCAGACATCCATCCTCAAGGATCTGGTCACCGCCACCAATCCGACAAGCCGCTGGAGCTTTCTCTCCTATCTTGTTGCG
AATAAACGCTTTTATCAGTTTCTAAACGCAGAATATGAAGCTGTTCCGCGCAAGGAATTTGCCGACTACCTCGGATGGGT
CGCGCGCGGGCTGACGTCGCTCCGCTTCGGCGACAGCGTGCGAGAGGTCCATGCCAATGACGGCTTCTTCTCCATCACCA
CCGACGATGGCGCGATCAGCGCCCGCAATCTCTCCGTCGGTGTCGGCAAGATTGCGTCTCGTCCGGCCTGGGCCGAGCAA
CTGCCCAAATCCATGACCTTCCATAGCAGCGAAGCGATGCAGCGCATCGGTGACGTCAAAGCGCCCCGCATTGCCGTCAT
CGGCGGCGGCCAGAGCGGCGCCGAGATCGTCGATGCGCTCCTGGATCTGACTAGGGTTTCATCCATCCACTGGATCAGCC
GCCGGCCGAATTTCGAGCCGCTCGATGCGACGCCATTCACCAACGAGCTCTTCACGCCAGGCTATATGGAACGCTTCCAC
GGACTTCCCGAGGAGCTGCGGCTCACGCACACGCGCCGGCAGGTGCTGGCCAGCGATGGCGTTTCCGCCTCCACCCTGAA
GAAGCTCTATCGCCGGCTCTACGAGCGAAAGCTCGAAACGCGGGGCGCCTCGGATCAAGGCATATCGCTGCGCCCCTTCC
GCAACGTCATCGCAGCCGAGCAGGATGGTCCCGAAATCACGCTGACGATGCGCAACGGCTTCGATGACAGCATCGAGACA
CTGACGGTCGACATGATCGTCTTTGCAACCGGCTATCGCTTCGTGCTTCCGGAGTTTCTGTATTCGCTCGAAAATCGCAT
CGAGCTCAACTCCATCGGCGAACCGGTGCTGGAAAGCGATTTCTCGCTCAGATGGGATGGGCCGCGTGAGAGCCGCATCT
TCGTTCTCAATGCCGGACGCCACAGCCACGGCATTGCCGAGCCGCAGCTCAGCCTTGCCGCATGGCGCAGCGCGGTCATC
GCCAACGCGTTGCTCGGCCGCCAGCATTTCGATCTCGATCAACTCGATCCCATCGTGCAGTGGGAAACGCACGGACAGCC
CTCGAACCTTCCCTCTCACATGGGGCAGGCAGCGGAATAG

Protein sequence :
MTSHVLDLAGAGIGPFNLSLAAQLDSIPQLSVRFFERRPSFAWHPGMMLPGAEMQTSILKDLVTATNPTSRWSFLSYLVA
NKRFYQFLNAEYEAVPRKEFADYLGWVARGLTSLRFGDSVREVHANDGFFSITTDDGAISARNLSVGVGKIASRPAWAEQ
LPKSMTFHSSEAMQRIGDVKAPRIAVIGGGQSGAEIVDALLDLTRVSSIHWISRRPNFEPLDATPFTNELFTPGYMERFH
GLPEELRLTHTRRQVLASDGVSASTLKKLYRRLYERKLETRGASDQGISLRPFRNVIAAEQDGPEITLTMRNGFDDSIET
LTVDMIVFATGYRFVLPEFLYSLENRIELNSIGEPVLESDFSLRWDGPRESRIFVLNAGRHSHGIAEPQLSLAAWRSAVI
ANALLGRQHFDLDQLDPIVQWETHGQPSNLPSHMGQAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 5e-78 42
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 5e-78 42
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 3e-78 42
iucD AAK71634.1 IucD Virulence SHI-3 Protein 3e-77 42
iucD AAD44749.1 IucD Virulence SHI-2 Protein 4e-78 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PC05660 YP_007337473.1 L-lysine 6-monooxygenase (Lysine 6-N-hydroxylase)(Lysine N(6)-hydroxylase) (Lysine-N-oxygenase) VFG1084 Protein 2e-77 42
RTCIAT899_PC05660 YP_007337473.1 L-lysine 6-monooxygenase (Lysine 6-N-hydroxylase)(Lysine N(6)-hydroxylase) (Lysine-N-oxygenase) VFG0937 Protein 1e-78 42
RTCIAT899_PC05660 YP_007337473.1 L-lysine 6-monooxygenase (Lysine 6-N-hydroxylase)(Lysine N(6)-hydroxylase) (Lysine-N-oxygenase) VFG0618 Protein 2e-78 42