Gene Information

Name : RTCIAT899_PC00510 (RTCIAT899_PC00510)
Accession : YP_007336459.1
Strain :
Genome accession: NC_020062
Putative virulence/resistance : Virulence
Product : two-component response regulator protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 110969 - 111742 bp
Length : 774 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATTGATTTCATGTTCAGGCGAACGAATATTCAACATTGATTATCTAGATATTGCGCGGAAACTAGTCAGCATTCT
TGGAGGAAATGTGTCGAAGATACTCGTGGTCGAGGACGACCTGGGGACAGCGTCGGAAATCGAGGCGGCACTTGTGGACC
ACGGCTGCACCGTTACACAGTCGGCCGATGGTCGCGATGGGCTGGTCAAGGCGATTTCCGGCACATTTGACGCCATCGTG
CTCGATCGCATGCTGCCCGGCACCCTTGATGGGCTCGCAATGCTCTCTGCCTTGCGGGCAGCTTCGGTACAAACCCCGGT
CCTGATTTTGAGCGCGCTTTCAGCGGTTGACGAACGGGTACGCGGTCTCAAGGCTGGAGGCGACGACTATCTGACGAAGC
CATTTGAAGCGCTCGAGCTGACGGCGCGGCTGGATGTCCTCATGCGCCGGCGAACCAACACGGCTCAGGAGACGGTTCTC
AAAGTCGGCGATCTTGAAATCAATCTCCTGACGCATACCGCCAGCCGGGCGGGTACCGCAATCGATCTTCTACCACGGGA
ATATCAGTTGCTTGAATATCTCGCCCGGCACTCAGGTCAGATCGTTACTCGCACGATGATGTTCGAAGAAGTCTGGCACT
ACCGCTACGGCGAGGCGACGAATGTCATCGACGTGCATATCAGCAAGCTTCGTAAGAAGCTGGATCTGCCTGGGCTTGCG
CCCCTGATCCGAACGCTTCGTGGCTCAGGTTATGTTCTCGATGCGACTGATTGA

Protein sequence : 
MKLISCSGERIFNIDYLDIARKLVSILGGNVSKILVVEDDLGTASEIEAALVDHGCTVTQSADGRDGLVKAISGTFDAIV
LDRMLPGTLDGLAMLSALRAASVQTPVLILSALSAVDERVRGLKAGGDDYLTKPFEALELTARLDVLMRRRTNTAQETVL
KVGDLEINLLTHTASRAGTAIDLLPREYQLLEYLARHSGQIVTRTMMFEEVWHYRYGEATNVIDVHISKLRKKLDLPGLA
PLIRTLRGSGYVLDATD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-34 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PC00510 YP_007336459.1 two-component response regulator protein BAC0125 Protein 4e-37 43
RTCIAT899_PC00510 YP_007336459.1 two-component response regulator protein BAC0308 Protein 7e-39 41
RTCIAT899_PC00510 YP_007336459.1 two-component response regulator protein BAC0638 Protein 1e-33 41
RTCIAT899_PC00510 YP_007336459.1 two-component response regulator protein BAC0197 Protein 5e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PC00510 YP_007336459.1 two-component response regulator protein VFG1389 Protein 2e-34 45
RTCIAT899_PC00510 YP_007336459.1 two-component response regulator protein VFG0596 Protein 4e-34 43