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Name : RTCIAT899_PB02370 (RTCIAT899_PB02370) Accession : YP_007336261.1 Strain : Genome accession: NC_020061 Putative virulence/resistance : Unknown Product : putative IS21 family transposase, OrfA Function : - COG functional category : - COG ID : - EC number : - Position : 446457 - 447986 bp Length : 1530 bp Strand : - Note : - DNA sequence : GTGATCCACATGGGACTTTTAAACATTATCCGCCGGATGGCGTTGCGCGAGAAGCTATCGATCCGCGAGATCAGTCGGCG CACCGGGCTGTCGCGGAACACAATCGCGAAGTATCTGAGCGCGGGCACGATCGAGCCGACGTTCACGGTACCGGAGCGGC CGAGCAAGCTTGATGCATTCGCAGAGAAACTCTCGGGCTGGCTGAAGACCGAGGCCGGGAGGTCACGCAAGCAGCGCCGA ACGCTGAAGCAACTTCATGCCGATCTGGTGGTTCTGGGCTTTACCGGCTCCTACGGTCGCGTCGCTGCCTTTGCCCGTGA GTGGCGGGCTGAGCAGCAGACGGCCGGCCGAGGCATATTCGTTCCTCTGTCTTTCCGCCCAGGCGAAGCATTCCAATTCG ATTGGAGTGAAGACTATGCCGTGATCGGCGGCGAGCGCACGAAGCTTCAGGTCGCGCATATCAAGTTGGCGCACAGCCGG GCCTTTCTGGTCAGAGCCTACCTGCTGCAAACCCATGAGATGCTCTTCGACGCCCACTGGCACGGCTTCCGGGTCTTCGG CGGTGTGCCTGCGCGAGGGATCTACGACAATATGCGCACCGCGGTCGATCGCGTCGGCCGCGGCAAGGAGCGGCAGGTCA ACATCCGCTTCCTGGCGATGACGAACCACTACGTCTTTGCGCCCGAGTTCTGTAATCCTGCTGCGGGCTGGGAGAAAGGG CAGGTCGAGAAGAATGTTCAGGATGCCCGACCACGTTTGTGGCAACAGATGCCGGACTTTCCCGATCTGCCGGCGTTGAA CGCCTGGCTGGAACAGCATTGCCAGGACCTGTGGCGGGAGACACCGCATGGCACCTTGCCCGGCACGATTGCGGATGTAT GGGCTGATGAGCGGGCATCATTGATGACACTGCCTGCCGCGTTTGACGGCTTTGTCGAGCAAAGCAAACGGGTCTCACCC ACCTGCCTGATCACCTTCGAACGAAACCGCTATAGCGTGCCCGCATCGTTTGCGAACCGGCCCGTCAGCCTGCGAATCTA TCCCGAGCGGCTGGTCGTTGCAGCCGAGGGCAACGTTCTTTGCGAACATGTGCGGGTCATTGAGCGCAGTCACGACAAGC CGCCGCGGACGATTTACGACTGGCGACACTACCTTGCCGTCATCCAACGCAAGCCCGGTGCCTTGCGCAATGGCGCACCC TTCCTGGAACTACCACCGGCCTTTCGACAACTGCAGGACCAGATGCTTCGCCGCCCCGGCGGTGATCGCGAGATGGCCGA TATCCTTTCTCTCGTTCTTCATCACGACGAACAGGTCGTCCTCCGCGCTGTGGAACTGGCTCTGGATGCCGGCGTGGCAA CCAAAACGCATGTGTTGAACCTGCTGCATCGGCTGATCGACGGCAAGACCAGTGATGGTCCCGATATCGACACACCACAG GCGCTGACCTTGCTGCGCGAACCCAAGGCCAATGTCGAACGCTATGACGGGCTGCGTGTCCGGATCGTAGGAGGTCGCCA TGCGTCATGA Protein sequence : MIHMGLLNIIRRMALREKLSIREISRRTGLSRNTIAKYLSAGTIEPTFTVPERPSKLDAFAEKLSGWLKTEAGRSRKQRR TLKQLHADLVVLGFTGSYGRVAAFAREWRAEQQTAGRGIFVPLSFRPGEAFQFDWSEDYAVIGGERTKLQVAHIKLAHSR AFLVRAYLLQTHEMLFDAHWHGFRVFGGVPARGIYDNMRTAVDRVGRGKERQVNIRFLAMTNHYVFAPEFCNPAAGWEKG QVEKNVQDARPRLWQQMPDFPDLPALNAWLEQHCQDLWRETPHGTLPGTIADVWADERASLMTLPAAFDGFVEQSKRVSP TCLITFERNRYSVPASFANRPVSLRIYPERLVVAAEGNVLCEHVRVIERSHDKPPRTIYDWRHYLAVIQRKPGALRNGAP FLELPPAFRQLQDQMLRRPGGDREMADILSLVLHHDEQVVLRAVELALDAGVATKTHVLNLLHRLIDGKTSDGPDIDTPQ ALTLLREPKANVERYDGLRVRIVGGRHAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 3e-155 | 60 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 1e-107 | 47 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 4e-89 | 42 |
