Gene Information

Name : RTCIAT899_PB02155 (RTCIAT899_PB02155)
Accession : YP_007336223.1
Strain :
Genome accession: NC_020061
Putative virulence/resistance : Unknown
Product : putative IS3 family transposase, IS51 group, OrfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 399822 - 400148 bp
Length : 327 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAAGACGACCAACAAATTTTCACCTGAAGTTCGTGACCGAGCCATCCGCATGGTTTTGGACCATGAGGCCGAGCA
TCCATCCCGGTGGGCGGCAGTTTCATCCATAGCCGCCAAGATTGGCTGCTCGGCACATACGCTGCATGAGTGGGTGAAGA
AAGCCGATGTTGACAGCGGCAAACGAGCAGGCCTTCCAAGCGATGTCGCCGAGAAGATGAAGGCCCTTGAGCGGGAGAAC
CGCGAGCTTCGACAGGCCAATGAGATTTTGCGTAAGGCGTCGGCTTATTTTGCCCAGGCGGAGCTCGACCGCCCACTGAA
GCGATGA

Protein sequence :
MSKTTNKFSPEVRDRAIRMVLDHEAEHPSRWAAVSSIAAKIGCSAHTLHEWVKKADVDSGKRAGLPSDVAEKMKALEREN
RELRQANEILRKASAYFAQAELDRPLKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 1e-23 57
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 1e-23 57
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 1e-23 57
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 3e-25 56
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 4e-25 56
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 3e-25 56
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 3e-25 56
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 3e-25 56
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 3e-25 56
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 3e-25 56
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 3e-25 56
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 3e-25 56
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 2e-21 54
unnamed AAF09023.1 unknown Not tested SHI-O Protein 3e-22 54
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-22 54
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 3e-22 54
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-22 54
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 3e-22 54
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 4e-22 54
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-22 54
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 4e-22 54
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 2e-20 54
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 4e-21 53
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-20 53
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-20 53
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 6e-20 53
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 9e-20 53
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 6e-20 53
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-20 53
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 3e-20 53
CDC7B_2036 YP_005163477.1 hypothetical protein Not tested Not named Protein 9e-13 41
CDCE8392_1959 YP_005134490.1 hypothetical protein Not tested Not named Protein 4e-13 41
CDCE8392_1775 YP_005134309.1 transposase-like protein Not tested Not named Protein 2e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PB02155 YP_007336223.1 putative IS3 family transposase, IS51 group, OrfA VFG0643 Protein 1e-22 54
RTCIAT899_PB02155 YP_007336223.1 putative IS3 family transposase, IS51 group, OrfA VFG1603 Protein 7e-22 54
RTCIAT899_PB02155 YP_007336223.1 putative IS3 family transposase, IS51 group, OrfA VFG0606 Protein 1e-21 53
RTCIAT899_PB02155 YP_007336223.1 putative IS3 family transposase, IS51 group, OrfA VFG1717 Protein 3e-20 53