Gene Information

Name : RTCIAT899_PB02105 (RTCIAT899_PB02105)
Accession : YP_007336215.1
Strain :
Genome accession: NC_020061
Putative virulence/resistance : Unknown
Product : putative IS66 family transposase, OrfC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 389787 - 391445 bp
Length : 1659 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAACGGCCTGGAAAACCACTCCGATTATGCCGCTGCACTTGAAGCAGAGCTGGTCGTGGCGCGTGCGGAGCGCGC
CGTTGCCTTAGCCGAACTTGCCGTCGCCAAAGCCAAGGAAGCGGACGATCAAGCCACCATTCTGCGTCAGAAGGTCCATA
TCGAAAAGCTGCAAAGGCAATTGCGTGGTCAGAAATCGGAGCGGACTGCCAGGCTGATCGCTCAAATGGAGCTGATGCTC
GAGGATGCCGAGGCGGCGGCCACCGAGGATGAACTTGCCGCTGAAATGGCCATTGCTGCGGCCGCCCCCATTGCTGTCGC
CGGCTTCACACGCAAACGCCCCGTTAAGAAGCCATTCCCCGATCACCTGCCGCGCGAGCGTGTCGTTGTGCCCGGTCCGG
TCGCCTGCAGCTGCTGCGGTAGTGACCGGCTGCGCAAGCTGGGCGAAGATGTCACCGAGACGATGGAGAGCATTCCACGC
TCCTGGAAAGTCATTCAGACGGTGCGCGAGAAGTTCACCTGCCGCGACTGCGAGAAGATCAGCCAGGCACCGGCCCCATT
CCACGTCATTCCCAGAGGCTGGGCAGGTCCAAGCCTTCTGGCGATGATCCTCTACGACAAATTCGGCCAACACATTCCCC
TTAATCGTCAGGTGGAACGATTTGCGCTTGAGGGCGTGTCAATCAGCCTGTCGACGGCAGCCGATGCTATCGGTTCTTGT
TGCCATGCCCTTGATCCAATCCTGAGGCGGATCGAGGCTCACACCTTTGCAGCCGAGCGGATTCACGGCGACGATACCAC
GGTTCCGGTTCTCGCAGCCGGCAAGACCGATACTGCTCGGATCTGGACATATGTGCACGATGATGCCCCGTTCGGTGGCA
CGGCGCCGCCGTCGGCGATGTTCTATTATTCCCGCGACCGCAGCGGTGACCATCCGCAGGCGCATCTGGCCGGCTATTGC
GGCATCCTGCAAGCAGATGCCTATGGCGGTTATACCAAGCTCTATCTTCCTGATCGCAGTCCAGGTCCGATCTATGAGGC
AGCGTGCTGGGCGCACGCAAGGCGACCATTCTTCATCATGGCCGATCTCGAGGCCAATGCCCGGCGCAAGGCTCAGGGCA
AACCCGCTGCCGTCATCTCACCAATCGCCATCGAGATGGTGCGCCGGATCGATGCGCTGTTCGAGATCGAACGTCAGATC
AATGGCCAGACGGCCGATGAGCGCAAGGCGACGCGTCAGCAGCATAGCAAGCCACTGATCGCCAACATGGAGCGGTGGGT
GCGCGAGCAACGTGCCAAGCTGTCTCGCGACAATGATCTGGCCAAAGCGTTCGACTACATGTTGAACCGCTGGGTATCGT
TTACTCGTTTCCTCGACGATGGCCGGATCTGCCTGTCGAACAACGCGGCAGAGCGTTCGCTGCGCGGAATTGCATTGGGA
AGAAAGGCTTGGCTATTCGCCGGCTCCGACCGTGGTGGTCAACGAGCTGCCGCCATGTACAGTTTGATCGTCACCGCAAA
GATGAACCATGTCGATCCGCAGGCCTGGCTTGCCGATGTGCTTGCCCGTATCGCCGACCACCCGGCAAACAGGATCGACG
AGTTGTTGCCGTGGGCTTGGAAGGCCGAAAAGGCGGCACCTATTGCGGCGGCCGCGTAA

Protein sequence :
MENGLENHSDYAAALEAELVVARAERAVALAELAVAKAKEADDQATILRQKVHIEKLQRQLRGQKSERTARLIAQMELML
EDAEAAATEDELAAEMAIAAAAPIAVAGFTRKRPVKKPFPDHLPRERVVVPGPVACSCCGSDRLRKLGEDVTETMESIPR
SWKVIQTVREKFTCRDCEKISQAPAPFHVIPRGWAGPSLLAMILYDKFGQHIPLNRQVERFALEGVSISLSTAADAIGSC
CHALDPILRRIEAHTFAAERIHGDDTTVPVLAAGKTDTARIWTYVHDDAPFGGTAPPSAMFYYSRDRSGDHPQAHLAGYC
GILQADAYGGYTKLYLPDRSPGPIYEAACWAHARRPFFIMADLEANARRKAQGKPAAVISPIAIEMVRRIDALFEIERQI
NGQTADERKATRQQHSKPLIANMERWVREQRAKLSRDNDLAKAFDYMLNRWVSFTRFLDDGRICLSNNAAERSLRGIALG
RKAWLFAGSDRGGQRAAAMYSLIVTAKMNHVDPQAWLADVLARIADHPANRIDELLPWAWKAEKAAPIAAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 1e-79 46
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-82 45
tnp AEA34686.1 transposase Not tested Not named Protein 3e-83 45
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-83 45
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-83 45
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-83 45
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-83 45
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 7e-84 45
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 9e-84 45
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-83 45
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-83 45
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-82 44
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-82 44
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-75 43
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-74 42
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 9e-74 42
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 9e-74 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PB02105 YP_007336215.1 putative IS66 family transposase, OrfC VFG0793 Protein 7e-84 45