Gene Information

Name : traGa (RTCIAT899_PA00995)
Accession : YP_007335835.1
Strain :
Genome accession: NC_020060
Putative virulence/resistance : Virulence
Product : conjugal transfer protein TraG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 190804 - 192777 bp
Length : 1974 bp
Strand : -
Note : -

DNA sequence :
ATGAATAGGATCCTTCTATACGTCGCACCCTGCGCATTGATGATGCTGACGGCGATCGGCATGGCGGGGGTCGAACACTG
GCTTTCCGCCTTCGGCAAGAGTGATGCCGCAAAACAGATGCTCGGCCGGACGGGCATCGCTCTACCCTATGTCGTCGCCT
CCCTCGCCGGCATCGTCTTCCTGTTTGCGAGCGCCGGCTCGGCAAGGATCAGGTCAGCCGGTTGGGGCGTTTTCACGGGC
GCGATCGCCACGCTCGTCGTCGCGATCCTGCGTGAGACGATACGGCTCTCCGCGTTCCGGGGCGAGGTGCCGGCCGGCAA
GTCGATCCTGAACTATCTCGATCCCGCAACGACGATCGGCGCGGCCGCCGTGCTGATGTCCGTGTTGTTCGGCATGCGGG
TGGCGATCGCCGGCAACGCCGCTTTCGCCAGGTCCGAGCCGAAACGCATTTACGGCAAGCGGGCTCTGCACGGCGAGGCC
GACTGGATGAAGCTGTCGCAAGCCGAAAAGCTGTTTGACGCGGATGGCGGCATGGTCATCGGCGAGCGCTACCGGGTCGA
TAGGGACAGCGTCGCGGCATACGCGTTTCGCGCCGACAGCGCCGAGACGTGGGGAGCAGGCGGGACCTCACCACTGCMCT
GCATCGACGGCTCGTTCGGCTCGTCGCACGGCATCGTCTTCGCCGGCTCCGGCGGCTTCAAGACGACATCGGTCACGATC
CCGACGGCGCTCAAATGGGGCGGGGCGCTCGTCGTCCTCGACCCGTCGAATGAGGTCGCTCCGATGGTGTCGAAGCACCG
TGGCGACGCCGACCGAGATGTCTTTGTCCTCGATCCGAAGCGCTCGGAGATCGGCTTCAACGCGCTCGACTGGATCGGCC
GGTTCGGCGGAACGAAAGAGGAGGATATCGCCTCGGTCGCCTCCTGGATCATGAGCGATAGCGGCGGCGCGCGCGGCGTT
CGTGATGATTTCTTCCGCGCCTCGGCCTTGCAGCTGCTGACAGCGCTGATTGCCGATGTTTGCCTCTCCGGCCACACGCC
GGAGAACGACCAGACGCTTCGGCAGGTGCGCAAGAACCTCTCCGAGCCGGAGCCGAAACTGCGGGAGCGGCTGCAGTCGA
TCTACGACAACTCAGACTCGGACTTCGTGAAGGAAAATGTCGCGGCTTTCGTCAACATGACGCCCGAGACCTTTTCCGGC
GTCTACGCCAACGCGGTCAAGGAAACACATTGGTTGTCCTATCCGAACTACGCCGCCCTGGTCTCGGGTACGAGCTTTAC
GACGCAAGATCTTGGAGAGGGAAAGACCGACATCTTCATCAATGTCGATCTCAAGACGCTGGAAACGCATTCGGGCCTGG
CGCGCGTCATCATCGGCTCGTTCCTGAACGCGATTTATAATCGCAATGGGCAAATGGAGGGCAGGACTCTCTTTCTCCTC
GATGAGGTCGCGCGCCTCGGCTACATGCGCATCCTTGAGACAGCCCGCGACGCCGGTCGGAAATACGGCATCACGCTCCT
CATGATCTACCAGTCGATCGGCCAGATGCGCGAGACCTATGGCGGTCGCGACGCGGCAAGCAAATGGTTCGAAAGCGCGA
GCTGGATTTCCTTTGCCGCCATCAACGATCCCGAAACCGCCGATTACATCTCGCGCCGTTGCGGCATGACGACGGTCGAG
ATCGACCAGGTCAGCCGCAGTTCTCAGGCGAGCGGATCGTCTCGCACACGATCGAAGCAACTGGCCGCCAGACCTCTGAT
CCAGCCTCATGAGGTCCTGCGCATGCGTGCCGACGAGCAGATCGTCTTCACGGCGGGGAACGCACCGCTGAGATGCGGCC
GTGCCATCTGGTTCCGGCGAGAGGATATGAAGAGGTGCGTCGGGACGAACAAGTTTCACCAGCTCAAAGGCAGGCCCGAC
GCGCATCCGATCGAGCCGGCGCGCAGTGCAACGAGCAAGGCCGATCGAGCATAA

Protein sequence :
MNRILLYVAPCALMMLTAIGMAGVEHWLSAFGKSDAAKQMLGRTGIALPYVVASLAGIVFLFASAGSARIRSAGWGVFTG
AIATLVVAILRETIRLSAFRGEVPAGKSILNYLDPATTIGAAAVLMSVLFGMRVAIAGNAAFARSEPKRIYGKRALHGEA
DWMKLSQAEKLFDADGGMVIGERYRVDRDSVAAYAFRADSAETWGAGGTSPLXCIDGSFGSSHGIVFAGSGGFKTTSVTI
PTALKWGGALVVLDPSNEVAPMVSKHRGDADRDVFVLDPKRSEIGFNALDWIGRFGGTKEEDIASVASWIMSDSGGARGV
RDDFFRASALQLLTALIADVCLSGHTPENDQTLRQVRKNLSEPEPKLRERLQSIYDNSDSDFVKENVAAFVNMTPETFSG
VYANAVKETHWLSYPNYAALVSGTSFTTQDLGEGKTDIFINVDLKTLETHSGLARVIIGSFLNAIYNRNGQMEGRTLFLL
DEVARLGYMRILETARDAGRKYGITLLMIYQSIGQMRETYGGRDAASKWFESASWISFAAINDPETADYISRRCGMTTVE
IDQVSRSSQASGSSRTRSKQLAARPLIQPHEVLRMRADEQIVFTAGNAPLRCGRAIWFRREDMKRCVGTNKFHQLKGRPD
AHPIEPARSATSKADRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virD4 YP_001610010.1 conjugal transfer coupling protein TraG Not tested Not named Protein 3e-101 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
traGa YP_007335835.1 conjugal transfer protein TraG VFG2242 Protein 6e-103 42