Gene Information

Name : RTCIAT899_PA00570 (RTCIAT899_PA00570)
Accession : YP_007335752.1
Strain :
Genome accession: NC_020060
Putative virulence/resistance : Virulence
Product : two-component response regulator protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 104724 - 105407 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
GTGTCGAAGATACTCGTGGTCGAGGACGACCTGGGGACAGCGTCGGAAATCGAGGCGGCACTTGTGGACCACGGCTGCAC
CGTTACACAGTCGGCCGATGGTCGCGATGGGCTGGTCAAGGCGATTTCCGGCACATTTGACGCCATCGTGCTCGATCGCA
TGCTGCCCGGCACCCTTGATGGGCTCGCAATGCTCTCTGCCTTGCGGGCAGCTTCGGTACAAACCCCGGTCCTGATTTTG
AGCGCGCTTTCAGCGGTTGACGAACGGGTACGCGGTCTCAAGGCTGGAGGCGACGACTATCTGACGAAGCCATTTGAAGC
GCTCGAGCTGACGGCGCGGCTGGATGTCCTCATGCGCCGGCGAACCAACACGGCTCAGGAGACGGTTCTCAAAGTCGGCG
ATCTTGAAATCAATCTCCTGACGCATACCGCCAGCCGGGCGGGTACCGCAATCGATCTTCTACCACGGGAATATCAGTTG
CTTGAATATCTCGCCCGGCACTCAGGTCAGATCGTTACTCGCACGATGATGTTCGAAGAAGTCTGGCACTACCGCTACGG
CGAGGCGACGAATGTCATCGACGTGCATATCAGCAAGCTTCGTAAGAAGCTGGATCTGCCTGGGCTTGCGCCCCTGATCC
GAACGCTTCGTGGCTCAGGTTATGTTCTCGATGCGACTGATTGA

Protein sequence : 
MSKILVVEDDLGTASEIEAALVDHGCTVTQSADGRDGLVKAISGTFDAIVLDRMLPGTLDGLAMLSALRAASVQTPVLIL
SALSAVDERVRGLKAGGDDYLTKPFEALELTARLDVLMRRRTNTAQETVLKVGDLEINLLTHTASRAGTAIDLLPREYQL
LEYLARHSGQIVTRTMMFEEVWHYRYGEATNVIDVHISKLRKKLDLPGLAPLIRTLRGSGYVLDATD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-34 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PA00570 YP_007335752.1 two-component response regulator protein BAC0125 Protein 3e-37 43
RTCIAT899_PA00570 YP_007335752.1 two-component response regulator protein BAC0308 Protein 1e-39 41
RTCIAT899_PA00570 YP_007335752.1 two-component response regulator protein BAC0638 Protein 1e-33 41
RTCIAT899_PA00570 YP_007335752.1 two-component response regulator protein BAC0197 Protein 4e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_PA00570 YP_007335752.1 two-component response regulator protein VFG1389 Protein 1e-34 45
RTCIAT899_PA00570 YP_007335752.1 two-component response regulator protein VFG0596 Protein 2e-34 43